Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 17/183 (9%)

Query: 339 NRGKGIKVVRYKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEK 398
           NRGK  K   +KV+ G+++  IA++Y  +   +K+AN + S+ I VG  L +P S     
Sbjct: 411 NRGKAQK---HKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPNP 467

Query: 399 AYALSVSNRLAKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALR 458
                ++N        P     +TH V +G+ L  +A  Y V   S+ K N +   D L 
Sbjct: 468 VPVPVMAN--------PVETETITHVVKTGDFLGKLATTYKVSVASIKKENNL-KSDTLV 518

Query: 459 KGQKLVIWKDSKPTSGVIRTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAG 518
            GQKL I    K          +KV+ G+ LS IA+++ V    I + N L + Q L  G
Sbjct: 519 LGQKLKITVSLKDKP----LRKHKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLL-VG 573

Query: 519 QQL 521
           QQL
Sbjct: 574 QQL 576



 Score = 45.4 bits (106), Expect = 6e-09
 Identities = 19/44 (43%), Positives = 32/44 (72%)

Query: 348 RYKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVP 391
           ++KV+ G+ LS IAD+YN +   I++ANQ+ ++Q+ VG  L +P
Sbjct: 536 KHKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLIIP 579