Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., lytic transglycosylase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  154 bits (390), Expect = 6e-42
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 48/405 (11%)

Query: 102 LKNPGHLQAIASRAEPFLYLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQF 161
           ++N  + + + +R   +  L  + +++  +P EL  L IVES  +P A S   AAGLWQF
Sbjct: 108 IRNRKYTRTMLTRENVYFPLFEKYLKKHNMPDELKYLAIVESGLNPLAQSPVGAAGLWQF 167

Query: 162 ISSTGKRYGLKQNFWYDGRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVAR 221
           +  TG+ YGL Q  + D R D   +T+AA+ +L  L+ ++ GDW  A+AAYN G+G V +
Sbjct: 168 MKPTGREYGLHQTQYIDERLDPEKSTEAAMRFLRRLHNYY-GDWELALAAYNCGQGNVNK 226

Query: 222 AIKANKKAGKPIDFFSLDLPKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVD 281
           AI+      K        LP+ET GYVP + A+   +    ++ I   +I  +P +A ++
Sbjct: 227 AIRRAGGGKKTFWEIFPYLPRETRGYVPSMTAVQYAMNYAGEHNIFSDSILYQPEVAYLE 286

Query: 282 PKEQLDLAIAARYAGLTVKELQSFNPAYNQ------------------------------ 311
             + LDL   A    L  KEL + NP   +                              
Sbjct: 287 VMQALDLEKLAEELHLDPKELMALNPELKKTNLPDHMRNYKLRIPASRSALLATADDKSC 346

Query: 312 --WATAPNGPH--------QLLIPVEKVERFNLAMEENRGKGIKVVRYKVKSGDTLSTIA 361
              A AP  PH         ++    K E+   A E+     +  V Y V+ GD L+ IA
Sbjct: 347 IMLAAAPVVPHTKDPEPETPVMFASAKTEQ---AAEKKEAPAVAKVTYTVQPGDNLTQIA 403

Query: 362 DKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQL 421
            +++ T + +KE N + S+ +     L V    +     AL+   +     +V +   +L
Sbjct: 404 KRHDVTVEQLKEWNNLKSSSLMPKQELLVMQQAEAGAVLALNTKGKPEAKSAVEK--KEL 461

Query: 422 THTVNSGESLWTIAKQYN-VPYQSLAKWNGMAPKDALRKGQKLVI 465
            + V  G++LW I+K+YN +  + + K N +   + ++ GQKL++
Sbjct: 462 IYHVQPGDTLWNISKKYNGISVEQIKKLNRLRSNE-IKPGQKLIL 505



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 470 KPTSGVIRTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYL 515
           K  +  +  VTY V+ GD L+ IA +  V    + +WN+L S+  +
Sbjct: 380 KKEAPAVAKVTYTVQPGDNLTQIAKRHDVTVEQLKEWNNLKSSSLM 425