Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., membrane-bound lytic murein transglycosylase C (VIMSS) from Escherichia coli BW25113

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 24/140 (17%)

Query: 105 PGHLQAIASRAEPFLYLITEKVEQRGLPLELVLLPI-VESSFDPFAYSHGSAAGLWQFIS 163
           P HL     RA  +L ++ +   + G+   L+L  +  ESSF+P+A S   A GL Q + 
Sbjct: 182 PNHLD---KRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQ 238

Query: 164 ST---------GKRYGLKQNFWYDGRRDVAAATDAALDYLTVLNQHFDGDW-------YH 207
            T         GK     ++F +D   ++    D    YL +LN  + G         Y 
Sbjct: 239 HTAGKDVFRSQGKSGTPSRSFLFDPASNI----DTGTAYLAMLNNVYLGGIDNPTSRRYA 294

Query: 208 AIAAYNSGEGRVARAIKANK 227
            I AYN G G V R    +K
Sbjct: 295 VITAYNGGAGSVLRVFSNDK 314