Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) from Enterobacter asburiae PDN3

 Score =  295 bits (756), Expect = 2e-84
 Identities = 177/484 (36%), Positives = 266/484 (54%), Gaps = 45/484 (9%)

Query: 1   MRVKFSWVLALLLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETES 60
           M+ K   + ++LLVGCQS         +   V    QS +   + +        AG+  S
Sbjct: 1   MKAKAILLASVLLVGCQS--------QNGSNVQQHAQSLSAAGQGE--------AGKFAS 44

Query: 61  VEEERVALTPQEQD-DVWQRIAMQFKLGIPKDPSVDAQREWFLKNPGHLQAIASRAEPFL 119
                   T   QD D+W  I  + K+GIP++P +  Q++ +L N  +L  +  RAEP++
Sbjct: 45  SARWMDDGTSYAQDQDLWTSIGDELKMGIPENPRIREQKQKYLSNKSYLHDVTLRAEPYM 104

Query: 120 YLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDG 179
           Y I  +V++R +P+ELVLLPIVES+FDP A S  +AAG+WQ I STG+ YGLKQ   YD 
Sbjct: 105 YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDA 164

Query: 180 RRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLD 239
           RRDV A+T AALD +  LN+ FDGDW   +AAYNSGEGRV +A+KANK  GK  DF+SL 
Sbjct: 165 RRDVVASTTAALDMMQRLNKMFDGDWLLTVAAYNSGEGRVLKAMKANKARGKSTDFWSLS 224

Query: 240 LPKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTV 299
           LP+ET  YVPK++AL+D++ N ++YG+ +P  +    LA V     +D+   A   G++V
Sbjct: 225 LPQETKIYVPKMLALSDILKNSKRYGVQLPTPDESRALARVRLSNPVDIQQVADMTGMSV 284

Query: 300 KELQSFNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENR-----------GKGIKVVR 348
            +L++FN          +GP  +++P +  E+   ++                  +    
Sbjct: 285 SKLKTFNAGVKGSTLGASGPQYVMVPQKHAEQLRESLASGEIAAVQSTLIADASSVNSRS 344

Query: 349 YKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRL 408
           YKV+SGDTLS IA +    AK +++ N + S+ ++VG  L V          A S + RL
Sbjct: 345 YKVRSGDTLSGIASRLGVNAKDLQQWNNLRSSGLKVGQTLTVG---------AGSSAQRL 395

Query: 409 AKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIWKD 468
           A           +T+ V  G+SL +IAK++ V  + + +WN     D L+ G +L ++  
Sbjct: 396 ASNSD------SITYRVRKGDSLSSIAKRHGVNIKDVMRWNN--DTDNLKPGDQLTLFVK 447

Query: 469 SKPT 472
           +  T
Sbjct: 448 NSAT 451



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 454 KDALRKGQKLVIWKDSKPTSGVIRTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQ 513
           +++L  G+   +       +  + + +YKVRSGDTLSGIA++  V   D+ +WN+L S+ 
Sbjct: 318 RESLASGEIAAVQSTLIADASSVNSRSYKVRSGDTLSGIASRLGVNAKDLQQWNNLRSSG 377

Query: 514 YLKAGQQL 521
            LK GQ L
Sbjct: 378 -LKVGQTL 384