Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., murein transglycosylase D from Dickeya dianthicola ME23

 Score =  319 bits (817), Expect = 2e-91
 Identities = 177/490 (36%), Positives = 283/490 (57%), Gaps = 39/490 (7%)

Query: 1   MRVKFSWVLALLLVGCQSPQPVDTTTSDD--QAVNPPTQSATVKKKRKPQTTATLPAGET 58
           M+ K  ++ +++L GCQ P P DT+      Q+++   QS   K     +T A       
Sbjct: 1   MKTKAIFIASVVLTGCQVP-PNDTSQPKQHAQSLSSAGQSEAGKYTDGRETGARW----- 54

Query: 59  ESVEEERVALTPQEQDDVWQRIAMQFKLGIPKDPSVDAQREWFLKNPGHLQAIASRAEPF 118
             ++++ +A     Q D+W  I  + K+ +P++  +  Q++ +LKN  +L  +  RAEP+
Sbjct: 55  --LDDDSIA-----QRDLWNFIGDELKMEVPENTRIREQKQRYLKNKSYLHDVTLRAEPY 107

Query: 119 LYLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYD 178
           +Y I  ++++R +P+ELVLLPIVES+FDP A S  +A GLWQ +  TG+ YGLK   WYD
Sbjct: 108 MYWIVGQIKERKMPMELVLLPIVESAFDPNARSSSNAVGLWQIVPGTGRNYGLKHTQWYD 167

Query: 179 GRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSL 238
           GRRDV A+T AALD +  LN+ FDGDW   +AAYN+GEGR+ +A+KANK  G+P ++++L
Sbjct: 168 GRRDVVASTTAALDMMQRLNRMFDGDWLLTVAAYNAGEGRIMQAVKANKDKGRPTNYWAL 227

Query: 239 DLPKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLT 298
            LP ETS YVPK++AL+D++ + +KYG+ +P       LA VD  +Q++L  AA  AGL+
Sbjct: 228 ALPYETSTYVPKMLALSDILKHNKKYGVELPKPNENRALARVDLGQQMELTQAAELAGLS 287

Query: 299 VKELQSFNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENRGKGI-------------- 344
           V +L+S+N  Y +  TAPNGPH +++P   V +   ++ E     I              
Sbjct: 288 VTKLKSYNTGYTRDVTAPNGPHYIMVPKSHVGQLKDSLAEGDIAAIQPAKAVQPASAVAT 347

Query: 345 KVVRYKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSV 404
           + V YKV+ GDTLS+IA + N   + ++  N++  N ++VG  L V  +     A  ++ 
Sbjct: 348 RSVGYKVRPGDTLSSIAKRMNVRTQDLQSWNRLKGNALKVGQTLQVAKATVPVTAGVVAS 407

Query: 405 SNRLAKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLV 464
           SN+             + + V  G+SL +IAK++ V    + +WN +     L+ G +L 
Sbjct: 408 SNK----------PNSIVYQVRKGDSLASIAKRHGVNIADVMRWNTIIKDANLQPGDRLT 457

Query: 465 IWKDSKPTSG 474
           ++  ++   G
Sbjct: 458 LYVTNRQAPG 467



 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 16/121 (13%)

Query: 418 QYQLTHTVNSGESLWTIAKQYNVPY-QSLAKWNG----MAPK-------DALRKGQKLVI 465
           Q +LT          T  K YN  Y + +   NG    M PK       D+L +G    I
Sbjct: 274 QMELTQAAELAGLSVTKLKSYNTGYTRDVTAPNGPHYIMVPKSHVGQLKDSLAEGDIAAI 333

Query: 466 W--KDSKPTSGVI-RTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQLK 522
              K  +P S V  R+V YKVR GDTLS IA +  V+T D+  WN L     LK GQ L+
Sbjct: 334 QPAKAVQPASAVATRSVGYKVRPGDTLSSIAKRMNVRTQDLQSWNRLKGNA-LKVGQTLQ 392

Query: 523 L 523
           +
Sbjct: 393 V 393