Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., FOG: LysM repeat from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  108 bits (269), Expect = 6e-28
 Identities = 118/492 (23%), Positives = 193/492 (39%), Gaps = 97/492 (19%)

Query: 103 KNPGHLQAIASRAEPFLYLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFI 162
           +NP + +    R + ++ +I   + ++G+P ++  L I ES   P A S  +A G WQF 
Sbjct: 61  RNPSYFKTKMERVDLYMPIIESVLREQGVPDDIKYLVIQESGLIPDAVSTSNAVGFWQFK 120

Query: 163 SSTGKRYGLKQNFWYDGRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARA 222
             T     L+ +   D R+++ A+T  A  YL   N  FD +W  A+ AY  G G     
Sbjct: 121 KGTAHEVFLQVDHHIDERKNIVASTKGAALYLKKNNSKFD-NWVCAMVAYQMGLGGAQNY 179

Query: 223 IKANKKAGKPIDFFSLDLPKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVDP 282
             +     K     ++ + + T  Y  K   LA  IA + + G  I    N   L  ++ 
Sbjct: 180 FGSQYNGDK-----TMKITRNTHWYFKKF--LAHKIAFEGQLGKFI----NNQHLEVIEV 228

Query: 283 KEQLDLAIAARYAGLTVKELQSFNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENRGK 342
           +    L   A+     +K  +S    YN+W +         IP +K              
Sbjct: 229 QGPTTLGQLAK----NLKVSESHLEEYNKWVSRKK------IPGDKTYSLTYL-----AT 273

Query: 343 GIKVVRYKVKSGDTLSTIAD------------KYNTTAKVIKEANQIASNQIRVGSYLFV 390
           G    R  + S +T S ++             K + T     E NQI  N I+    +  
Sbjct: 274 GTPSYRPVLTSSNTSSPVSTPKAVGTNHAGYPKISGTQSQPFEKNQIRINGIK--GIIAA 331

Query: 391 PTSVKDEKAYALSVS-------NRLAKTQSVPRGQYQLT-----------HTVNSGESLW 432
            T+  D+ +  + +        N L+K+  V +GQY  T           H V  GE+LW
Sbjct: 332 VTTTSDDFSERIGIREGKFRRVNDLSKSDPVVKGQYYYTKRKKGKAKTPYHVVRKGETLW 391

Query: 433 TIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIWK------------------------- 467
            I++ Y +   SL   N +   + LR+G  L + K                         
Sbjct: 392 GISQAYGIRLHSLKAKNRLYKDEDLREGMVLKLQKYLRRNEAFEYRQVSPSPSNRQTNTA 451

Query: 468 ----------DSKPTSGVI---RTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQY 514
                     D  P   V    R +T+KV  G+TL  IA K+ V  + I +WN++++   
Sbjct: 452 KPSPTPAGTTDPIPAQKVTPDNRQLTHKVAKGETLYAIARKYGVTVSQIQQWNNISNQSL 511

Query: 515 LKAGQQLKLYVD 526
           +  GQ+L ++ D
Sbjct: 512 IHVGQELIIHRD 523