Pairwise Alignments

Query, 156 a.a., ribonuclease HI from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., ribonuclease H from Agrobacterium fabrum C58

 Score = 72.8 bits (177), Expect = 2e-18
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 11/149 (7%)

Query: 1   MNKQVEIFTDGSCLGNPGPGGYGIVMRYKQVEKTLARGYRL-TTNNRMEMLAAVMALQ-- 57
           M+  + IFTDGS       GG+  V+     +   A G     +NN  E+LA + A+   
Sbjct: 1   MSDALHIFTDGSFDDATRSGGWAFVVHEGGDQVHSATGKAAGASNNSFEVLAVLNAMSWV 60

Query: 58  ALKEPCR-VILTTDSQYVRQGITQWIHNWKLRGWKT------ADKKPVKNADLWQALDKE 110
           A + P R V L TD+ +V +G  ++   W+  GWK       A ++P+ ++++WQ LDK 
Sbjct: 61  AAEAPTRDVTLWTDAVHVIEGCRRYRAIWRNNGWKRITPNQRARRRPIPDSEIWQQLDKL 120

Query: 111 TARH-QVEWRWVKGHAGHRENEMCDELAR 138
             RH  V   W KGH+G   NE  D LAR
Sbjct: 121 LERHPHVAVEWCKGHSGLVGNEHADALAR 149