Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

 Score =  246 bits (628), Expect = 3e-70
 Identities = 134/245 (54%), Positives = 166/245 (67%), Gaps = 16/245 (6%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R VVLDTETTGM     P  +GHRIIEIG VE++ R+LTGRHFHVYL+PDRD    AI V
Sbjct: 4   RSVVLDTETTGM-----PVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDRDSDEGAIGV 58

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGA-IGKTSDF 129
           HGITDEFLK KP + +V +EF +FI GA+L+ HNA FDVGF++ EFA +G       S  
Sbjct: 59  HGITDEFLKGKPRFAEVADEFFEFINGAQLIIHNAAFDVGFINNEFALMGQTDRADISQH 118

Query: 130 CKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTS 189
           C + DTL MA+   PG+RN+LD LC+RYG+DNS R LHGALLD+EILADVYL MTGGQTS
Sbjct: 119 CSILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTS 178

Query: 190 LQF-------SSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKS-- 240
           L         S   + SG   +E ++R  ++RK   ++ AS  +L  H  RL+ +AKS  
Sbjct: 179 LSLAGNASDGSGSAEGSGNRPSE-IRRLPADRKPTTIIRASEQDLAEHAARLEAIAKSAG 237

Query: 241 GTCLW 245
              LW
Sbjct: 238 APALW 242