Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., DNA polymerase III subunit epsilon from Pseudomonas sp. DMC3

 Score =  243 bits (620), Expect = 3e-69
 Identities = 131/244 (53%), Positives = 169/244 (69%), Gaps = 14/244 (5%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R VVLDTETTGM     P  +GHRIIEIG VE+I R+LTGRHFHVYL+PDR+    AI V
Sbjct: 4   RSVVLDTETTGM-----PVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGV 58

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLG-GAIGKTSDF 129
           HGIT+EFL  KP + +V +EF +FI+GA+L+ HNA FDVGF++ EFA +G       +  
Sbjct: 59  HGITNEFLVGKPRFAEVADEFFEFIQGAQLIIHNAAFDVGFINNEFALMGQHDRADITQH 118

Query: 130 CKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTS 189
           C + DTL MA+   PG+RN+LD LC+RYG+DNS R LHGALLD+EILADVYL MTGGQTS
Sbjct: 119 CTILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTS 178

Query: 190 LQFS------SVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKS--G 241
           L  +      + T    + SA  ++R   +R+  +++ A+ +EL AH  RL+I+AKS   
Sbjct: 179 LSLAGNASDGNGTGEGADNSATEIRRLPVDRQPARIIRATEEELAAHLVRLEIIAKSAGA 238

Query: 242 TCLW 245
             LW
Sbjct: 239 PALW 242