Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 14  VLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVHGI 73
           ++D ETTG    G PH +  +I EI        K+  + +H  + P+R I     ++ GI
Sbjct: 4   IVDIETTG----GQPHQD--KITEIAIFIHDGEKIVDK-YHTLINPERPIPYFITQLTGI 56

Query: 74  TDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCKVT 133
            D+ + + P++ +V +E V+F +G   VAHN  FD  FM  EFA LG    +     K  
Sbjct: 57  KDDMVLEAPKFYEVAKEIVEFTEGKVFVAHNVRFDYSFMKKEFADLGFTFQR-----KTL 111

Query: 134 DTLAMAKRIFPGKRN-NLDILCERYGIDNSHRTLHGALLDAEILA 177
            T+ +++ + PG  + +L  LC    I  S R  H A+ DAE  A
Sbjct: 112 CTVRLSRSLIPGLPSYSLGKLCNSIDIPLSQR--HRAIGDAEATA 154