Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           RI V+D ETTG++       +G R  E+  V     ++  R +   +     I     ++
Sbjct: 3   RIAVIDFETTGISPG-----QGDRATEVAIVITEQGRVVDR-YQSLMNAGVRIPSFITQL 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
            GIT+  ++  P    V  E   F+    +VAHNA FD  F   E  + G    +     
Sbjct: 57  TGITNAMIETAPPADTVMREAARFVGEVPMVAHNAAFDRRFWMAELERAGAEAPQ----- 111

Query: 131 KVTDTLAMAKRIFP-GKRNNLDILCERYGIDNSHRTLHGALLDAEILADV 179
               T+ +++R++P    + L  L + + +  + +  H AL DAE+ A++
Sbjct: 112 PFACTVLLSRRLYPEAPSHKLGSLVDFFRLPRTGQA-HRALADAEMAAEL 160