Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., DNA polymerase III subunit epsilon from Magnetospirillum magneticum AMB-1

 Score =  164 bits (416), Expect = 1e-45
 Identities = 96/237 (40%), Positives = 137/237 (57%), Gaps = 13/237 (5%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTG +        GHR++EIG VE+ N   TG  FH Y  P+RD+  EA +V
Sbjct: 2   REIVLDTETTGFDP-----LSGHRLVEIGCVELFNHLPTGSVFHRYCNPERDMPEEAFKV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
           HG++ +FL DKP + ++  +F++FI    LV HNA FD+ F++ E  +LG          
Sbjct: 57  HGLSADFLSDKPLFAEIVADFLEFIGDVPLVIHNAEFDMRFINAELTRLG---FPPLPMS 113

Query: 131 KVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGG-QTS 189
           +  DT+ MA++ FPG + NLD LC R+ IDN+HRT HGALLD+E+LA+VYL + GG Q  
Sbjct: 114 RSIDTVMMARKRFPGAQANLDALCRRFEIDNTHRTKHGALLDSELLAEVYLQLIGGRQPG 173

Query: 190 LQFSSVTQN-SGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKSGTCLW 245
           L+      N +G  +  S  +   E +  +    + +E  AH      VAK    +W
Sbjct: 174 LELGGGKGNGAGGTANASTHQVTREFREPRPHGPTEEETAAH---TAFVAKLKNAVW 227