Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., DNA polymerase III, epsilon subunit, Proteobacterial from Kangiella aquimarina DSM 16071

 Score =  263 bits (673), Expect = 2e-75
 Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 5/225 (2%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTG+        +GHRIIEIG VE++NRK TG H+H YL+PDR+I   AIEV
Sbjct: 2   RQIVLDTETTGLEPS-----DGHRIIEIGCVELVNRKFTGNHYHQYLQPDREIDEGAIEV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
           HGIT+EFL DKP + DV +EF++FI+GAELV HNAPFDVGF+D+E   L  + GK SD+C
Sbjct: 57  HGITNEFLADKPRFVDVVDEFLEFIEGAELVIHNAPFDVGFLDHELNLLDSSKGKLSDYC 116

Query: 131 KVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTSL 190
            V DTL +A+++ PG+RN+LD LC+RY IDNSHR LHGALLD+EILADVYL MTGGQTSL
Sbjct: 117 TVLDTLVLARQMHPGQRNSLDALCKRYDIDNSHRELHGALLDSEILADVYLRMTGGQTSL 176

Query: 191 QFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLD 235
                   + + +  +++R  S R+ LKV+ AS  E +AH  +L+
Sbjct: 177 TLGRQNAANQQTAETTIRRISSNRQPLKVIKASEQEAEAHLKKLE 221