Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 16/190 (8%)

Query: 14  VLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVHGI 73
           ++D ETTG       + + HRI E+ AV     ++    F   + PD +I      + GI
Sbjct: 5   IVDIETTG------GYGKRHRITEVAAVAHNGSQILDS-FQTLINPDCEIPGFITGLTGI 57

Query: 74  TDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCKVT 133
               ++  P ++D+ +E   F++    VAHN  FD  F+  EF +    IGK+ D  K+ 
Sbjct: 58  DQSMVEGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFER----IGKSFDRPKLC 113

Query: 134 DTLAMAKRIFPGKRN-NLDILCERYGIDNSHRTLHGALLDAEILADVYL-LMTGGQTSLQ 191
            T+ ++++IFPG R+ +L  +CE   I+   R  H A  DAE  A+++  L+   Q  + 
Sbjct: 114 -TVRLSRKIFPGLRSYSLGRICEHKNIEIKSR--HRAFGDAEATAELFTKLLLADQEGIV 170

Query: 192 FSSVTQNSGE 201
              + +NSGE
Sbjct: 171 EQLLKRNSGE 180