Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA polymerase III subunit epsilon from Azospirillum sp. SherDot2

 Score =  194 bits (494), Expect = 1e-54
 Identities = 110/225 (48%), Positives = 147/225 (65%), Gaps = 11/225 (4%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTG   E     EGHR++EIG +E++N   TG  FHVYL P+RD+  EA  V
Sbjct: 2   REIVLDTETTGFKPE-----EGHRLVEIGCIELVNHLATGERFHVYLNPERDMPPEAFAV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
           HG++ EFL DKP + DV  +FV FI  A LV HNA FD+ F+++E  K+ G      D  
Sbjct: 57  HGLSTEFLADKPLFNDVAADFVAFIGDAPLVIHNAAFDMHFLNWEL-KIAGYPVMPKD-- 113

Query: 131 KVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGG-QTS 189
           +  DTL MA++ FPG    LD LC+R+G+DNS+RTLHGALLDA++LA+VYL + GG QT 
Sbjct: 114 RAVDTLLMARQKFPGSPATLDALCKRFGVDNSNRTLHGALLDAQLLAEVYLELLGGRQTG 173

Query: 190 LQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRL 234
           L F+    + G + A  ++  R  R+A +V A S DE+ AH + L
Sbjct: 174 LSFAGGPASKGGV-ASPVRIDRPFREA-RVFAVSDDEVAAHAEML 216