Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA polymerase III subunit epsilon from Alteromonas macleodii MIT1002

 Score =  284 bits (726), Expect = 1e-81
 Identities = 144/238 (60%), Positives = 178/238 (74%), Gaps = 9/238 (3%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTG++ +     EGHRIIEIG VE++NR+LTG HFHVY+ P R I+ EAIEV
Sbjct: 2   RQIVLDTETTGIDPK-----EGHRIIEIGCVEVVNRRLTGNHFHVYINPGRHIEQEAIEV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGK-TSDF 129
           HGIT+EFL DKP +  V +EFV FIKGA+LV HNAPFDVGFMD+EF       G  T+  
Sbjct: 57  HGITNEFLADKPTFSQVAQEFVSFIKGAQLVIHNAPFDVGFMDHEFGMEASTKGVITNQI 116

Query: 130 CKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTS 189
           C V DTL +A+++ PG++NNLD LC+RYGIDNSHRTLHGALLDAEILADVYLLMTGGQT 
Sbjct: 117 CDVLDTLTLARQMHPGQKNNLDALCKRYGIDNSHRTLHGALLDAEILADVYLLMTGGQTK 176

Query: 190 LQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKS-GTCLWR 246
           L+ +S   +  +  + +++R       LKV+ ASADE+  H+ RLDIV K+ G CLWR
Sbjct: 177 LKLAS--SSGSDADSTAIRRINRSANKLKVIKASADEITQHEARLDIVEKAGGKCLWR 232