Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., DNA polymerase III, epsilon chain from Agrobacterium fabrum C58

 Score =  185 bits (469), Expect = 8e-52
 Identities = 106/222 (47%), Positives = 143/222 (64%), Gaps = 11/222 (4%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKP-DRDIQLEAIE 69
           R ++ DTETTG+  +        R+IEIG +E+IN   TGR  H+Y+ P DR +  +A+ 
Sbjct: 2   REIIFDTETTGLESKLD------RVIEIGGIELINHFPTGRTLHLYISPEDRKVHPDALA 55

Query: 70  VHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDF 129
           VHGITDEFLKDKP++ +V ++  +F  GA  VAHNA FD+GF++ EFA+LG  I   S  
Sbjct: 56  VHGITDEFLKDKPKFAEVIDQIREFFDGARWVAHNATFDMGFINAEFARLG--IEPVSAE 113

Query: 130 CKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGG-QT 188
             VTDTL++A+R  P   N+LD LC RYGIDNSHRT HGALLD+E+LA+VY+ M GG QT
Sbjct: 114 L-VTDTLSLARRKNPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQT 172

Query: 189 SLQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAH 230
           +L F S  +    +  E +  A  +R +       AD + AH
Sbjct: 173 ALGFGSAARQETIIIEEDVPLAPLQRPSALPSRLDADTIAAH 214