Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  767 bits (1980), Expect = 0.0
 Identities = 402/787 (51%), Positives = 529/787 (67%), Gaps = 16/787 (2%)

Query: 40  LFGPVGFFGWA----LYLAAVVVLCLPSVRQSLISGKALAVFKKVLPAMSQTEKEALEAG 95
           LF  V  FG A    L +A  +++ +  +R++L++ +AL +F+ ++PAMS TE+ A+E+G
Sbjct: 38  LFNVVAGFGTAVAAILVVAPALLMTIKPLRRTLLTRRALGLFRTIMPAMSDTERAAIESG 97

Query: 96  TVWWEAELFKGKPDWKKLHNIQAPKLSAEEQAFLDGPVNEVCAMVSDYQVTHELADLPPE 155
           TVWW+AELF GKP+W++L       LSAEEQAFLD  V  +C + +D++ T    D+ PE
Sbjct: 98  TVWWDAELFSGKPNWQRLLQAAPASLSAEEQAFLDNEVETLCDIANDWETTQIWQDMSPE 157

Query: 156 VWTFLKEKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQ 215
            W + K+  F  MII KQYGG  FS YA S V+ KL+      + +V VPNSLGP ELL 
Sbjct: 158 GWQYTKDAGFLGMIIPKQYGGKGFSHYAHSQVVMKLSTRCSAAAISVMVPNSLGPAELLL 217

Query: 216 HYGTEEQKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLT 275
           HYGT+ Q+NYYLPRLA G++IPCFALTSP AGSDAG+IPD G+VCKG  EG+EVLG R+T
Sbjct: 218 HYGTDAQRNYYLPRLARGEDIPCFALTSPYAGSDAGAIPDLGIVCKGTHEGEEVLGFRVT 277

Query: 276 WNKRYITLAPVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVP 335
           W+KRYITL P+ATVLGLAF+  DP+GLLG    LGITCALIPT   GV  G RH+PLN  
Sbjct: 278 WDKRYITLGPIATVLGLAFRAEDPDGLLGAPGSLGITCALIPTSHPGVNSGRRHWPLNAV 337

Query: 336 FQNGPTRAKDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATG 395
           FQNGPT  KD+F+PL+++IGG +  G GWRML+ECL+ GR I+LPS + G  K A   T 
Sbjct: 338 FQNGPTTGKDVFIPLEWVIGGREQVGNGWRMLMECLAAGRAISLPSANVGLGKVAVRGTT 397

Query: 396 AYARIRRQFKQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGIDLGEKPSVISAIVKYH 455
           AYA +R+QF  PIG+ EG++ PLAR+AG+ Y  DA   ++VA +D GEKPSVISAI KYH
Sbjct: 398 AYAAMRKQFGLPIGKFEGVQAPLARMAGHLYACDAVRKVSVASLDAGEKPSVISAIAKYH 457

Query: 456 CTHRGQRSIIDAMDIVGGKGICLGPANFLARGYQGAPIAVTVEGANILTRSMIIFGQGAI 515
            T R +  + D MDIV GKGIC+GP NFLAR YQ +PIA+TVEGANI+TR +IIFGQG I
Sbjct: 458 VTERARIIVNDGMDIVAGKGICMGPNNFLARAYQQSPIAITVEGANIMTRCLIIFGQGLI 517

Query: 516 RCHPYVLREMEAAYSPN-SDAVEKFDSALAGHVGFVLSNLVRSLWLGLTDG--YGSQAPT 572
           RCHPYV REMEAA +P+   A+E FDSA+ GHV FVL+N VR+    LT G    + A T
Sbjct: 518 RCHPYVFREMEAARNPDRRKALEAFDSAMFGHVSFVLANTVRAAVHSLTGGRLIAAPAKT 577

Query: 573 RDATKRYYQQLNRYSANLALLADISMAVLGGSLKRRERLSARLGDILSQLYLSSATLKRF 632
             A   YY+Q NR S  LAL++DISM VLGG+LKR+E ++ RLGD+LSQLY+ S  LKRF
Sbjct: 578 EPALASYYRQANRLSVVLALISDISMGVLGGALKRKESITGRLGDMLSQLYILSCVLKRF 637

Query: 633 ENDGRPAEDLPLVHWGLQDSLRQTEIAIDEFLANFPNRIIGRALRVLMMPFGRVRKAPSD 692
           E+DGRP  DLPLVHW  QD+L +   A+ E   N+P++     +R L  PFG   + PSD
Sbjct: 638 EDDGRPQADLPLVHWSAQDALLRAHEALAEVFDNYPSKPAAAVVRGLTFPFGIPLRKPSD 697

Query: 693 KLDSKLAQILQTPSETRSRIGRHQYLTPSDNNPAGKIEQALNVILQAEPLFEKACKAL-- 750
           +L +++A ++QTP ETR R+  + Y+   + +     E    ++ Q E +  +   A+  
Sbjct: 698 RLLAQVADVVQTPGETRDRLLANSYIPRPEIDKLSYGELGFRLLPQVELIDARLKPAVKQ 757

Query: 751 GQRRPFMGLDEVAKLGLEAK-----VLTIQEAALLSEAEAHRLYTINVDDFAPQELAAKK 805
           G   P M +   A  G   +     +++  E  LL     +  + I VDDF PQ+    +
Sbjct: 758 GLIEP-MPISATAFTGWRVRARALDLISDDEDTLLGRYVEYADHGIQVDDF-PQDFGLLE 815

Query: 806 RTQRKAE 812
             Q++ +
Sbjct: 816 ALQQRKQ 822