Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 91/350 (26%), Positives = 161/350 (46%), Gaps = 38/350 (10%)

Query: 170 IKKQYGG----LEFSAYAQSLVLQ-KLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKN 224
           + ++YGG    L  +  A+ LV +  +TG   +  +T+     L       H+GT+EQ+ 
Sbjct: 54  VPEEYGGPGLDLTTTCMAKELVARVSMTGAQLINQNTISFVLPL------LHFGTDEQRR 107

Query: 225 YYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLA 284
            +LPR+A+G  +   A+T P AGSD G++    V      EG   +   +   K +IT+A
Sbjct: 108 KWLPRVAKGGVVSSVAITEPHAGSDVGAMKTNAV-----REGDHYV---VNGQKCFITMA 159

Query: 285 PVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAK 344
           P+A  + L  K     G +  +    I+C ++     G+ +G     +    Q G   A 
Sbjct: 160 PLADYITLFAK----TGEVNRRGVDNISCFIVDMKSAGITLGGSEKMMG---QRGTPHAD 212

Query: 345 DLF----VPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARI 400
             F    VP++  +G     G+G+   +  L + R  T+ +++ G  + A     AYA+ 
Sbjct: 213 IFFDNVRVPVENRMG---EEGRGFISCMHILDLNRP-TVAASAVGVAQGAFDIAVAYAKE 268

Query: 401 RRQFKQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGIDLG--EKPSVISAIVKYHCTH 458
           R+ F + IG+ +G++  LA +        A        ID G  ++ + ++++VK  CT 
Sbjct: 269 RKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKCTRAIDAGQHDRLTEMASMVKCFCTD 328

Query: 459 RGQRSIIDAMDIVGGKGICLGPANFLARGYQGAPIAVTVEGANILTRSMI 508
              +   DA+ ++GG G   G  N + R  + A +    EG N + R +I
Sbjct: 329 VAMKVTTDAVQVLGGHGYIRG--NHVERMMRDAKVLQIYEGTNQIQRMVI 376