Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Sphingobium sp. HT1-2

 Score =  105 bits (263), Expect = 4e-27
 Identities = 97/347 (27%), Positives = 157/347 (45%), Gaps = 28/347 (8%)

Query: 166 FAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNY 225
           + M   + YGG E  + + +L L +L    G LS+ V + NS+    LL+  G+EEQK  
Sbjct: 57  WGMTAPEAYGGAEADSVSYALALMELAAADGALSTIVSIQNSILVSGLLKD-GSEEQKAR 115

Query: 226 YLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAP 285
           +LP L  G+ I  FALT  +AGSDA ++    V   G W        R+T  K++IT   
Sbjct: 116 FLPDLIGGRTIGAFALTESDAGSDASAVRTRAVKVDGGW--------RITGAKQFITSGK 167

Query: 286 VATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGN-RHFPLNVPFQNGPTRAK 344
           +  V+ +   + DP     D  + G++  L+PT   G  +    H            R  
Sbjct: 168 IGGVV-MIVAVTDP-----DAGKKGLSVFLVPTDRPGYAVDKVEHKMGQGASDTCALRFD 221

Query: 345 DLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQF 404
           D+FV  D +IG P   GQG+   +  L  GR I + +   G  + A     AYA+ R+ F
Sbjct: 222 DMFVEDDLLIGQP---GQGYAQALANLETGR-IGIAAQCVGMAQAALEIAIAYAKDRKSF 277

Query: 405 KQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGI---DLGEKPSVISAIVKYHCTHRGQ 461
            + I + + +   LA LA     ++AA  L ++     D G+     +++ K   +   +
Sbjct: 278 GKAIIEHQAVGFRLADLATR---LEAARQLVLSAAAMKDSGQPALTQASMAKLFASEAAE 334

Query: 462 RSIIDAMDIVGGKGICLGPANFLARGYQGAPIAVTVEGANILTRSMI 508
             +  AM  +GG G        +A+ Y+   +    EG + + R +I
Sbjct: 335 AVVSGAMQTLGGYGYL--EEFGIAKIYRDVRVCQIYEGTSDIQRMVI 379