Pairwise Alignments

Query, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 9e-28
 Identities = 107/352 (30%), Positives = 170/352 (48%), Gaps = 30/352 (8%)

Query: 162 EKKFFAMIIKKQYGGLEFSAYAQSLVLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEE 221
           E  F  M++ + YGG E  A A +L L+++    G  S+ + V NS+G   +L+ +GTEE
Sbjct: 45  ELGFLGMLVSEDYGGSETGAVAYALALEEIAAGDGACSTIMSVHNSVGCVPILK-FGTEE 103

Query: 222 QKNYYLPRLAEGKEIPCFALTSPEAGSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYI 281
           QK  +LP+LA G+ I  FALT P+AGSDA ++       + + +G   +   L   K++I
Sbjct: 104 QKQRFLPKLAAGEWIGGFALTEPQAGSDASNLK-----TRARRDGDRYV---LDGAKQFI 155

Query: 282 TLAPVATVLGLAFKLRDPEGLLGDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPT 341
           T      V+ + F + D     G K   GIT  ++PT   G E+      L +   +   
Sbjct: 156 TSGKNGDVI-IVFAVTD--AAAGKK---GITAFIVPTDTPGYEVIRVEEKLGLHSSDTCQ 209

Query: 342 RA-KDLFVPLDFIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARI 400
            A  ++ VP+D  +G     GQG+R+ +  L  GR I + + + G  + A  A   YAR 
Sbjct: 210 IAFTEMAVPVDLRLG---EEGQGYRIALANLEGGR-IGIAAQAVGMAQAAFEAARDYARE 265

Query: 401 RRQFKQPIGQMEGIEEPLARLAGNAYVMDAASNLTVAGIDL---GEKPSVISAIVKYHCT 457
           R+ F Q I + + +     RLA  A  + AA  L +    L   GE     +++ K   +
Sbjct: 266 RKAFGQAIIEHQAV---AFRLADMATRITAARQLVLHAAALKEAGEPCLSEASMAKLFAS 322

Query: 458 HRGQRSIIDAMDIVGGKGICLGPANF-LARGYQGAPIAVTVEGANILTRSMI 508
              +R   DA+ I GG G     A++ + R Y+   I    EG + + R +I
Sbjct: 323 EMAERVCSDAIQIHGGYGYM---ADYPVERIYRDVRICQIYEGTSDVQRMVI 371