Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  128 bits (321), Expect = 5e-34
 Identities = 79/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%)

Query: 289 DGQKVYLNSRWVDEFQWYIIVEQKDEFNHDIWFKATLGNLAISAFVAL------GVLGLA 342
           DG++ +L + +V  +   + V   +      W+      LA++  V+L        L  +
Sbjct: 255 DGERRFLRTAYVGRYPLSVTVGLSERRQFGGWYLRAAITLALTVTVSLLLALTVSALATS 314

Query: 343 QMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQV 402
               R  +++LE MA+ D LTG  NR+  +  +D  +  + +E   L++ +ID+DHFK+V
Sbjct: 315 LRRSREMERQLERMAITDSLTGLPNRRALDLTLDVEMQRSRRERRELAVLMIDIDHFKRV 374

Query: 403 NDNYGHPAGDLVLQRVVALCQRHIAQVGT-LCRWGGEEFVVLLPHMTQQEAYQRMESIRA 461
           ND +GH  GD VL  V    QR   + G  +CR+GGEEFVV+LP      A    E IRA
Sbjct: 375 NDTHGHAVGDAVLAEVAHRVQRAACRPGDFVCRYGGEEFVVVLPETPAAGAELVGERIRA 434

Query: 462 EIA-----MHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKVVGL 512
            +A      H    ++TVS+G+   + ++    L  R+D+A+YTAK  GRN+V  L
Sbjct: 435 GVAATAVMTHGLAIEITVSVGIAVQRADDGPGELVARSDKALYTAKRAGRNRVARL 490