Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  108 bits (270), Expect = 5e-28
 Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 9/177 (5%)

Query: 341 LAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFK 400
           LA+ + +   + L  +A  D LTG  NR+ FE + D     A ++ H L LA++D+DHFK
Sbjct: 384 LAERALKRAHEELALIASSDPLTGLANRRRFETIFDQEWHRAERDRHGLCLAMVDIDHFK 443

Query: 401 QVNDNYGHPAGDLVLQRVVALCQRHI-AQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESI 459
            VND +GH  GD  L+RV  + + ++   VG   R+GGEEFV+LLP+ +  +       I
Sbjct: 444 GVNDTFGHLVGDECLRRVAMVIKANLPPSVGLAARYGGEEFVLLLPNTSAVQGQALCARI 503

Query: 460 RAEI------AMHASQPQVTVSIG--VVQYQQNESLLHLFNRADQAMYTAKSEGRNK 508
             ++      A+     +VTVSIG  + +  Q  S+  L   AD+A+Y AKS GRN+
Sbjct: 504 HDDLQREPWSAVAPGLDRVTVSIGLCIARAPQEASMAGLIRIADEALYRAKSSGRNR 560