Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  346 bits (888), Expect = e-99
 Identities = 199/489 (40%), Positives = 287/489 (58%), Gaps = 21/489 (4%)

Query: 36  RMLIMTRKKFSWILVTLIIFGFFVTSLVSYKVAHDTLEEQINKDSLPLTSDNIYSEIQQD 95
           R  + +++     L+ L+  GF  TSL+SY  +   + + I    LPLTSD +YSEIQ+D
Sbjct: 4   RSALFSQRSLIVTLLVLLACGFLATSLLSYSSSRSAIRDGIINTELPLTSDTVYSEIQKD 63

Query: 96  LIRPIFISSLMAQDTFVREWTLAGEQDPERIIRYLREIQRQYQTISSFYISDRTGHYYHY 155
           LIRP+ I+S+MAQDTF+R+W L+GEQ  ER+ RYL E+  +    +SF++SDRT  YY  
Sbjct: 64  LIRPVLIASMMAQDTFLRDWVLSGEQHTERMTRYLSEVLGKQDIFTSFFVSDRTLTYYQA 123

Query: 156 TGILKQVSESNPNDAWFYRVKN-SAPDKNFEVNIDIDTANSQQTVVFVNYKVFDFENRFL 214
            G+LK V      DAW++R++   AP   +E+N+D+D AN     VF+NY+V D++ RF+
Sbjct: 124 KGVLKHVQPGTWRDAWYFRLRELKAP---YEINVDLDMANQDSLTVFINYQVHDYQQRFI 180

Query: 215 GVIGVGLSSDAVSALVEKYQKRYNRHIYFINELGEVTLHGSHHPGFDQIQQREGLK---- 270
           G  GVGLS  +V  L+++YQ+RY R + F +  G+V L GS   G   +Q  + LK    
Sbjct: 181 GAAGVGLSVSSVVKLIDQYQRRYQRAVLFTDAKGKVLLTGS-EGGPHGLQVGQLLKDNPE 239

Query: 271 ---TLATQILTSPSVGASYYADGQ--KVYLNSRWVDEFQWYIIVEQKDEFNHDIWFKATL 325
               LA Q +  P  G+  Y D +    +LN R + E  WY++V++++    D    A  
Sbjct: 240 LKAMLAEQWV--PGEGSHEYHDSENHSHFLNVRHLPELDWYLLVDKRETGVLDRIRHALY 297

Query: 326 GNLAISAFVALGVLGLAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKE 385
            NLAI   + L VL L     R +Q   E +A  D LTG YNR+ F+ L   A+  A ++
Sbjct: 298 LNLAICTMITLVVLALVHAMVRRHQASTEALATLDSLTGLYNRRSFDLLAAQALREARRD 357

Query: 386 SHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLP 445
           S PL   +IDLDHFK +NDN+GH AGD VL++   + Q  + Q   LCRWGGEEF+VLL 
Sbjct: 358 SSPLVALLIDLDHFKALNDNHGHLAGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLR 417

Query: 446 HMTQQEAYQRMESIRAEIAM----HASQP-QVTVSIGVVQYQQNESLLHLFNRADQAMYT 500
               ++A +  E IR         + +QP ++T SIG+   Q  ++L  L  RAD+A+Y 
Sbjct: 418 EAEGRQAIEVAEKIRRRTEQLTFSYDNQPLRLTTSIGLSSLQPGDTLHALLTRADRALYR 477

Query: 501 AKSEGRNKV 509
           AK  GRN+V
Sbjct: 478 AKQAGRNRV 486