Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  107 bits (266), Expect = 9e-28
 Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 5/170 (2%)

Query: 343 QMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQV 402
           Q + RG  ++LED+   D+LTG +NR+ F  +    ++  + +     LA+IDLDHFK++
Sbjct: 190 QDTLRGMMRQLEDLVATDELTGLFNRRHFLRIASRELNALDSDVMH-GLALIDLDHFKRI 248

Query: 403 NDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIR-- 460
           ND +GH AGD VLQ    + Q  +     L R+GGEEFVVL+P    +      E +R  
Sbjct: 249 NDLHGHAAGDQVLQAFAGVAQACLRDGDVLARYGGEEFVVLVPDCDAERLTACCERLRIA 308

Query: 461 -AEIAMHASQPQ-VTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNK 508
            +E+ +   Q + +++S G+      + L     RADQA+Y AK +GRN+
Sbjct: 309 FSEVELMGLQVRNLSLSAGMTLLAVGDDLDEALQRADQALYRAKRDGRNR 358