Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  108 bits (269), Expect = 4e-28
 Identities = 68/172 (39%), Positives = 99/172 (57%), Gaps = 10/172 (5%)

Query: 347 RGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNY 406
           R +   L+  A  D LT   NR++F+  ++ A+  A     PLSL +ID+DHFKQ ND Y
Sbjct: 167 RNHLDDLKREASTDALTQLANRKLFDHSLNLAVLDARAADAPLSLLMIDIDHFKQFNDTY 226

Query: 407 GHPAGDLVLQRVVALCQRHIAQV-GTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEIAM 465
           GH  GD VL ++VA     +AQ   T  R+GGEEF V+LP    +++ +  E+IR +++ 
Sbjct: 227 GHQLGDQVL-KLVARSLSEVAQAKDTAARYGGEEFAVILPATPLEKSMEVAETIRNQVST 285

Query: 466 HASQ--------PQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKV 509
                        QVT+SIG    ++ E+   L +RAD+AMY AK +GRN+V
Sbjct: 286 KRLTNRRTGQVLGQVTLSIGAALLREAEAPDSLVHRADEAMYLAKRDGRNRV 337