Pairwise Alignments

Query, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  111 bits (277), Expect = 6e-29
 Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 2/163 (1%)

Query: 350 QKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHP 409
           +++LE  A  D +TG  NR+ F  + +         +   SL +ID D FK +ND YGH 
Sbjct: 246 EEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHS 305

Query: 410 AGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEIA--MHA 467
            GD VL  +    +    +   + RWGGEEFV+LLP      A    E+IR  +A    +
Sbjct: 306 KGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSIS 365

Query: 468 SQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNKVV 510
             P+ TVSIGV  ++ NES+  LF R D A+Y AK++GRN+V+
Sbjct: 366 GLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVL 408