Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 20/175 (11%)

Query: 77  PIYIALNKPTGI-TCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNK 135
           P  I  NKP  + T  ++      + DFI     I+P GRLD+ S+GL+ LTNDG +  +
Sbjct: 32  PKLILFNKPFDVLTQFSDEGGRATLKDFIAI-PGIYPAGRLDRDSEGLLLLTNDGQLQAR 90

Query: 136 ILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQ----------- 184
           I    +   K Y V+V+   T E ++++  GV + D  TLP +  Q  +           
Sbjct: 91  IADPKHKLAKTYWVQVEGEPTEEQLQRLRDGVELNDGKTLPAQARQLDEPQLWPRNPPVR 150

Query: 185 -------YSFRIVLTQGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWR 232
                  Y   +V+ +G NRQ+RRM  A+G    +L RVRI + T+DG+  G+W+
Sbjct: 151 FRKNIPTYWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTIDGLDQGQWK 205