Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  205 bits (521), Expect = 2e-57
 Identities = 122/318 (38%), Positives = 180/318 (56%), Gaps = 14/318 (4%)

Query: 19  KRLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSK-ERP 77
           KRLNKFIS++G+CSRREAD+LIE+ RVT+NG  PE G KVT +D+V ID + L  + E P
Sbjct: 4   KRLNKFISDSGFCSRREADRLIEEERVTVNGKLPEAGVKVTPKDKVRIDDQLLSVRDEAP 63

Query: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137
           +Y+ LNK +G++ T +  V  N+V  I H   + PIG+LD+  +G++ L+ND D V K+ 
Sbjct: 64  VYLVLNKLSGMSATADMGVRDNVVRAINHPASLQPIGKLDREDEGVLLLSNDSDFVRKLS 123

Query: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSG-VNILDTVTLPCKVTQETQYSFRIVLTQGLN 196
           +A +  EKE VV V+KP +PEFI ++S    +  D       V +E+   FRI L  G+N
Sbjct: 124 KADSRLEKELVVTVNKPFSPEFISKLSEACASFEDGHPKKAVVNKESTTRFRITLEPGMN 183

Query: 197 RQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSSGTEEAS 256
             I+++CEA+GY+V  L+RVR+ +ITL  +  G WR L+ AE+  +  +     G   A 
Sbjct: 184 HGIKKVCEAMGYKVTFLQRVRVQHITLTKLQKGHWRTLTAAELDTLKQVAAAKPGKPAA- 242

Query: 257 RVAQSGDTIKRATDAKLFDSREANKESKAR--RNPKTYHGKNAQEFRHAPNSKKAQRRPS 314
                    K   DAK F  R A+   KA   R       ++A   R     +  + RP+
Sbjct: 243 ---------KGRPDAKEFSPRGASGREKASFDRGGHQKPDRSAAPERGGAGKRIGKSRPA 293

Query: 315 SPSSNTASGSKPTPRTGG 332
           +     A G++   +  G
Sbjct: 294 AAGPGGAKGTRGGAKGSG 311