Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., 23S rRNA pseudouridine synthase F from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  291 bits (746), Expect = 1e-83
 Identities = 160/314 (50%), Positives = 209/314 (66%), Gaps = 10/314 (3%)

Query: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLR-SKERPI 78
           RLNKFIS++GYCSRREADK+IEQGRV +NG +P+VG+KVT +D+V +DG  L  +   P+
Sbjct: 5   RLNKFISDSGYCSRREADKMIEQGRVMVNGKRPDVGAKVTAKDKVRVDGNLLEVNAVEPV 64

Query: 79  YIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKILR 138
           Y+ LNKP GI  TT+     NI+ F  + +RIFP+GRLDK S+GLI LTNDGDIVNKILR
Sbjct: 65  YLLLNKPAGIETTTDTSQRDNIISFTNYPERIFPVGRLDKDSEGLIILTNDGDIVNKILR 124

Query: 139 AGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNRQ 198
           AGN HEKEYVV VD+PI  +F+ +MS GV+IL   T  C V QE    FRI+LTQG+NRQ
Sbjct: 125 AGNRHEKEYVVTVDRPINQDFVEKMSGGVSILGVNTKKCFVAQEGPNKFRIILTQGMNRQ 184

Query: 199 IRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSSGTEEAS-- 256
           IRRMCEALGYEV  L+R RIM+++L+ IP G+WR ++E EV+E+L +   S+ TEE S  
Sbjct: 185 IRRMCEALGYEVQTLQRTRIMHLSLNKIPLGQWRNMTEPEVAELLRLVAGSTKTEEGSVG 244

Query: 257 --RVAQSGDTIKRATDAKLFDSREANKESKA---RRNPKTYHGKNAQEFRHAPNSKKAQR 311
             R A++    K            A K ++A   +    T  GK  ++   + +S +  R
Sbjct: 245 KKRAAEASAPAKSNKPKPRTGGSAAGKSTRAGGPKGGKSTAGGK--RDKPKSQSSARGSR 302

Query: 312 RPSSPSSNTASGSK 325
             S  S   A+G K
Sbjct: 303 GASKGSPKGAAGGK 316