Pairwise Alignments

Query, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Erwinia tracheiphila SCR3

 Score =  268 bits (684), Expect = 2e-76
 Identities = 143/270 (52%), Positives = 180/270 (66%), Gaps = 3/270 (1%)

Query: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPL--RSKERP 77
           RLNK+ISE+G CSRR+AD+ IEQG V +NG +  VG +V   D V ++G+ +  R  E  
Sbjct: 8   RLNKYISESGICSRRDADRYIEQGNVFINGKRASVGDQVHVGDAVKVNGQLIEARDAEDL 67

Query: 78  IYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNKIL 137
           + I LNKP GI  T E     NI DF+ H KR+FPI RLDK S GLIFLTN GD+VNKIL
Sbjct: 68  VLIVLNKPVGIITTMEEGERDNISDFVNHSKRVFPIDRLDKDSQGLIFLTNHGDLVNKIL 127

Query: 138 RAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLTQGLNR 197
           RAGNNHEKEYVV V+K IT EFI  M +GV +L TVT  CKV +E  + FRI L QGLNR
Sbjct: 128 RAGNNHEKEYVVTVNKLITDEFIAGMGAGVPMLGTVTKKCKVKKEAPFVFRITLVQGLNR 187

Query: 198 QIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSSG-TEEAS 256
           QIRRMC+  GYEV KL R RIMN++L G+P G+WR L++ E++E+  + E+SS     A 
Sbjct: 188 QIRRMCKHFGYEVTKLERTRIMNVSLKGLPLGEWRDLTDDELTELFRLLENSSSEAPTAK 247

Query: 257 RVAQSGDTIKRATDAKLFDSREANKESKAR 286
           +      T K ++ AK  D    N  ++ R
Sbjct: 248 KTKPRPATAKNSSGAKSVDKASGNSTARKR 277