Pairwise Alignments

Query, 298 a.a., TraB/GumN family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 58/282 (20%), Positives = 124/282 (43%), Gaps = 32/282 (11%)

Query: 33  YWSATK-GSTQLILLGSLHVGSDQLYPLPDQLAQKLKQSAGLVVETD-----------IR 80
           +W   K G+    LLG++HV   ++  +P   +   +++A ++VE+D           + 
Sbjct: 90  FWRIEKAGTAPSYLLGTMHVTDPRVLEMPTAASPAFEKAATVIVESDEIVDDKKVAASLL 149

Query: 81  HQSNITLPATTLSSEQVLSDEQLFVLDGIAQQLRLDAQQIRQQPPWSASLILQMRQFLEM 140
            +  +T+     S   +LS E +  L+   ++  +    + +  PW  S  + +    E 
Sbjct: 150 SKPELTMFLNGKSITDILSSENVARLEKGLKERGIPLNAVSRMKPWMLSSFVALPA-CEF 208

Query: 141 GYQAD--RGIDLYFMQQAEQHQLPILSLETLQFQVDLLAHLPNSGQ-ELLVSLIDEWENN 197
             +A     +D    + A      ++ LET+  Q+  ++ LP     + L+  ++  +  
Sbjct: 209 ARKATGLSFLDKKLAEDAIADGKRLVGLETMVEQLTAMSELPMEFHLQALIETLELGDRM 268

Query: 198 TQLTECMIESWKKGDEKNLLQMLTL-----TGMSAE-----LEAHMLTERNRDWAEKLTH 247
             +   M + +  GD    + ML       T + +E      E  ++T+RN   A++ T 
Sbjct: 269 DDVMTTMTDLYVAGDIGMTMPMLKSIDPKKTAVESEQGYAAFEQRIITDRNHVMADRAT- 327

Query: 248 PQFLPQQGKPYL-VVVGTLHLIGKQSLLSILEQKGFSIQQLN 288
               P+  K  + + VG LHL G++ L+ +L  +GF++ +++
Sbjct: 328 ----PELAKGNVFMAVGALHLPGEEGLVELLRAEGFTLTRVD 365