Pairwise Alignments

Query, 915 a.a., copper-exporting P-type ATPase A from Vibrio cholerae E7946 ATCC 55056

Subject, 834 a.a., copper-exporting P-type ATPase CopA from Escherichia coli ECRC100

 Score =  803 bits (2075), Expect = 0.0
 Identities = 421/826 (50%), Positives = 585/826 (70%), Gaps = 8/826 (0%)

Query: 79  LQGLNCGRCVNKLTTHLSAQAEIAKLHVSKERLSLVTTLTAEQVKALVAEVGYQAIEAEQ 138
           L GL+CG CV ++   L  + ++ +  VS     +  T +AEQ+   + + GY A  +  
Sbjct: 9   LDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAGYDASVSHP 68

Query: 139 ESTFAPAASIDEKETDTPDAENSSNTEATEASSQTLSLLIKGMTCASCVASVEKALLSVE 198
           ++     +SI    ++   A + +   AT     +  LL+ GM+CASCV  V+ AL SV 
Sbjct: 69  KAKPLAESSIP---SEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNALQSVP 125

Query: 199 GVQSAQVNLTEQSALVRGIFANPQPLLNAIQSSGYQAEILDDPAQQQAKQQAQLEALQKE 258
           GV  A+VNL E++ALV G  A+PQ L+ A++ +GY AE ++D A+++ +QQ    A  K 
Sbjct: 126 GVTQARVNLAERTALVMGS-ASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVATMKR 184

Query: 259 HKQSALLGIALGTPLMLWGVFGGNMMIRNSSDQMVWGGIGTICFALLLTAGRHFFMNAWQ 318
            +  A++ +A+G P+M+WG+ G NMM+  + ++ +W  IG I  A+++ AG HF+ +AW+
Sbjct: 185 FRWQAIVALAVGIPVMVWGMIGDNMMV-TADNRSLWLVIGLITLAVMVFAGGHFYRSAWK 243

Query: 319 ALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFPDAARHVYFEATAMIIGLISLGHYIE 378
           +L +G ATMDTLVALGTG AW YSM V  WPQ FP  ARH+Y+EA+AMIIGLI+LGH +E
Sbjct: 244 SLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLE 303

Query: 379 TKAKSNTNRSLQALLNLQPQQATLVTEQGDQSIAVADIQLGMSLRIKPGEQVPVDGVVST 438
            +A+  ++++L+ LL+L P  A LVT++G++S+ +A++Q GM LR+  G++VPVDG ++ 
Sbjct: 304 ARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGEITQ 363

Query: 439 GHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGSLVITATGIGAQTMLARIIQMVRQAQ 498
           G ++LDE+MLTGEPIP  K  G  V AGT+ QDGS++  A+ +G+ T L+RII+MVRQAQ
Sbjct: 364 GEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQ 423

Query: 499 SSKPAMARLADQISSVFVPVVVVIAILSAALWYLYGPDPKASYMLVVATTVLIIACPCAL 558
           SSKP + +LAD+IS+VFVPVVVVIA++SAA+WY +GP P+  Y LV+ATTVLIIACPCAL
Sbjct: 424 SSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCAL 483

Query: 559 GLATPLSITVGIGKAAEMGILIRDANVLQTASQVDTVVFDKTGTLTLGKPSIQSLHVLQG 618
           GLATP+SI  G+G+AAE G+L+RDA+ LQ AS +DTVVFDKTGTLT GKP + ++     
Sbjct: 484 GLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFAD 543

Query: 619 -DENQLLALAYALEQQSEHPLAKAICDYAKQRNISPVEISQFTNQRGRGLLADYQNQTVL 677
            DE Q L LA ALEQ S HPLA+AI D A    +   +++ F   RG G+  + +   +L
Sbjct: 544 FDEAQALRLAAALEQGSSHPLARAILDKASDMQLP--QVNGFRTLRGLGVSGEAEGHALL 601

Query: 678 VGSLAFMQEQGIDLSMAESTLEKFAAQAWTPVAVAYRGMLQGVLAIADPIKPTSAQAVRK 737
           +G+ A + +Q +D    E+ +   A+Q  TPV +A  G    +LA+ DP++  S  A+++
Sbjct: 602 LGNQALLNDQQVDTKAIEADISAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQR 661

Query: 738 LNELGIHTVMLTGDHTSVANAIAKELGISQVIAQVLPDQKAQHIQALQQQGRKVAMIGDG 797
           L++ G   VMLTGD+ + ANAIAKE GI +VIA VLPD KA+ I+ LQ +GR+VAM+GDG
Sbjct: 662 LHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDG 721

Query: 798 INDAPALALADIGIAMGSGSDVAIESAQMTLLNSSPTSVVSAIELSKATLRNMKQNLFGA 857
           INDAPALA AD+GIAMG GSDVAIE+A +TL+  S   V  A+ +S+ATLRNMKQNL GA
Sbjct: 722 INDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781

Query: 858 FIYNTLGIPIAAGVLYPAFGFLLSPVVAGAAMALSSITVVSNANRL 903
           FIYN++GIP+AAG+L+P  G LL+PVVAGAAMALSSITVVSNANRL
Sbjct: 782 FIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRL 827



 Score = 47.0 bits (110), Expect = 5e-09
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 171 SQTLSLLIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAIQS 230
           SQT+ L + G++C  CV  V+++L     V+ A V++TE  A V G  A+ + L+  I+ 
Sbjct: 2   SQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITE--AHVTGT-ASAEQLIETIKQ 58

Query: 231 SGYQAEILDDPAQQQAKQQAQLEAL 255
           +GY A +    A+  A+     EAL
Sbjct: 59  AGYDASVSHPKAKPLAESSIPSEAL 83



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 36/162 (22%)

Query: 15  LALRGLNCMGCARKLERQLNQDLTVEIETLTPTSIELHTHATLNEVLTSIESLGYQGGT- 73
           L L GL+C  C ++++  L Q   VE   ++ T   +   A+  +++ +I+  GY     
Sbjct: 7   LTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAGYDASVS 66

Query: 74  ---------------------------------EQTYQLQGLNCGRCVNKLTTHLSAQAE 100
                                             Q   L G++C  CV ++   L +   
Sbjct: 67  HPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNALQSVPG 126

Query: 101 IAKLHVS-KERLSLVT-TLTAEQVKALVAEVGYQAIEAEQES 140
           + +  V+  ER +LV  + + + +   V + GY A   E ++
Sbjct: 127 VTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDA 168