Pairwise Alignments

Query, 474 a.a., glutamate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Glutamate--tRNA ligase 1 from Xanthobacter sp. DMC5

 Score =  175 bits (444), Expect = 2e-48
 Identities = 111/298 (37%), Positives = 159/298 (53%), Gaps = 2/298 (0%)

Query: 6   RFAPSPTGYLHVGGARTALYSWLYAKSQGGEFVLRIEDTDLERSTQAAVDAIIEGMTWLG 65
           RFAPSPTG +HVG ARTAL + L A+  GG F+LR +DTD  RS     DAI   + WLG
Sbjct: 13  RFAPSPTGLIHVGNARTALLNALIARRAGGTFILRFDDTDAARSRAEYADAIAADLAWLG 72

Query: 66  LEWDEGPYYQTKRFDRYNQVIDQLLAEGKAYKCYAPKELLDEIRAEQEANKEMPRYDANH 125
           +  D     Q+ R   Y    ++L A G+ Y  Y  +E LD  R  Q A    P YD   
Sbjct: 73  IAPDV-TVRQSDRIADYVAAAERLKAMGRLYPAYETEEELDLKRGLQRARGLPPVYDRAA 131

Query: 126 PKIKAVNDAAKEGEPCCIRFRNPKEGSVV-FDDQIRGRIEIRNDQLDDLIIRRTDGTPTY 184
             +   + A  E E     +R   +  VV +DD +RG  ++    L D ++ R DG+  Y
Sbjct: 132 LALSPEDRARLEDEGRRPHWRFRLDHRVVAWDDGVRGPQQVDTATLSDPVLVRADGSFLY 191

Query: 185 NFCVVVDDVDMGISHVIRGEDHINNTPRQINIYKAMGATIPTFAHCAMILGDDGAKLSKR 244
               VVDD+ +G++ VIRGEDH+ NT  QI I++A+G  +P FAH  ++    G  LSKR
Sbjct: 192 TLPSVVDDLALGVTQVIRGEDHVTNTAVQIEIFEALGGPVPGFAHHNLLTLPSGEGLSKR 251

Query: 245 HGAVSVMQYRDDGYLPEALLNYLVRLGWGHGDQEIFSRDEMINLFSLNAISKSASAFN 302
            G +S+   R+ G    A+    V +G  H  + + S D +  +  L+AIS++ + F+
Sbjct: 252 LGHLSLSALREAGQEALAVAALSVLVGTSHAVEPVDSLDTLAAMVDLSAISRAPARFD 309



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 430 PLRVAVTGGGQSPSVDAVMNLIGQERVIARIKMAL 464
           PLR+A+TG    P + A++ L+G+ R   R+K A+
Sbjct: 419 PLRLALTGRETGPELAALLPLMGRARAEGRLKGAV 453