Pairwise Alignments

Query, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 61/136 (44%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 179 VEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQY- 237
           V+     P PVA  VE+V V K       D   F   SA L  +  ++L+ I   L Q  
Sbjct: 95  VDANGCPPEPVAV-VEEVVVQKEEVIVIRDVH-FEFDSARLTASDKERLNTIATRLKQEA 152

Query: 238 PQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGID-ASRISAKGLGESSPIASN 296
           P A++ V GHTDS GS++YNQKLSERRA +V   L   G+  +S +S  G GE+ P+A N
Sbjct: 153 PSARLSVSGHTDSVGSDSYNQKLSERRAHSVTDYLVESGVPRSSFVSVVGAGETQPVADN 212

Query: 297 ATAEGREKNRRVELVI 312
           ATAEGR  NRR E+ I
Sbjct: 213 ATAEGRAMNRRTEIKI 228