Pairwise Alignments

Query, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., OmpA family protein from Pseudomonas sp. SVBP6

 Score =  103 bits (258), Expect = 3e-27
 Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 1/128 (0%)

Query: 183 PAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQYPQAKV 242
           P  P    AP E  A ++  T     +  FA+ SA+L  A  Q+L  +   LN      V
Sbjct: 110 PQYPVSQKAP-EPAATSQVITLSDQGAVMFASDSAQLTSAAQQQLQALGSKLNGANVVSV 168

Query: 243 EVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASNATAEGR 302
           +V+GHTDS GS+AYNQ LSERRA +VA+ L +QG+  S+++++G GES PIA N T  GR
Sbjct: 169 KVIGHTDSQGSDAYNQALSERRASSVAEYLISQGLAPSKVTSQGRGESQPIAENDTDAGR 228

Query: 303 EKNRRVEL 310
            +NRRVEL
Sbjct: 229 AQNRRVEL 236