Pairwise Alignments

Query, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Enterobacter asburiae PDN3

 Score =  158 bits (399), Expect = 2e-43
 Identities = 120/347 (34%), Positives = 174/347 (50%), Gaps = 38/347 (10%)

Query: 1   MKKLAAIISATLL-FASSAAVAEV----YVGGKVGKSWLDDACLAGQSCEDDDQV----- 50
           MKK A  I+  L  FA+ A  A      Y GGK+G S   D      S  +D        
Sbjct: 1   MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLGWSQFHDTGWYNSSLNNDGPTHESQL 60

Query: 51  -VGAFLGYQANKWLSLEAGYDYLGKFTAAG--LNDE-KVQAVTLAPKLSIPLTEGIALYG 106
             GAF GYQ N ++  E GYD+LG+    G  +N   K Q V L  KL  P+T+ + +Y 
Sbjct: 61  GAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDTINGAFKAQGVQLTAKLGYPITDDLDVYT 120

Query: 107 KVGGAYVDYGSKDDYSY---------LGAAGLEFNTNHNVTMRLEYQ---NLTDINNDIV 154
           ++GG      S ++ S          + A G+E+    ++  RLEYQ   N+ D N   V
Sbjct: 121 RLGGMVWRADSSNNISGDNHDTGVSPVFAGGVEWAMTRDIATRLEYQWVNNIGDGNTVGV 180

Query: 155 RARAETATLGIAYKFGGSEEPAPVVEQRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFAT 214
           R      ++G++Y+FG  EE APVV      PAP  AP  +   TK FT +      F  
Sbjct: 181 RPDNGMLSVGVSYRFGQQEEAAPVVA-----PAPAPAPEVQ---TKHFTLK--SDVLFNF 230

Query: 215 ASAELKPATVQKLDKIVGYLNQYP--QAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKAL 272
             A LKP   Q LD++   L+        V V+G TD  GS+AYNQKLSE+RAQ+V   L
Sbjct: 231 NKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSEKRAQSVVDYL 290

Query: 273 EAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVIPEFQYQV 319
            ++GI A++IS +G+GES+P+  N     + +   ++ + P+ + ++
Sbjct: 291 ISKGIPANKISPRGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEI 337