Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 52.4 bits (124), Expect = 7e-11
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 24/195 (12%)

Query: 18  KLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDT 77
           KL  +SA ++ +    FA+AET+ +  +E     +VV   + ++ + E + SV V + +T
Sbjct: 2   KLSPVSAAVLSVLAAGFAHAETEPSHYEE-----VVVTANRIEQPLSEVAGSVAVLEGET 56

Query: 78  IERTPGATEIDDLLQLIPNLV---DSGQSNNMPTIRGIDGSGPSV--GGLASFAGTSPRL 132
           +E+  G TE+ D L   P +     +G+  N+ TIRG+ G+  ++   G+ S  G     
Sbjct: 57  LEK-QGKTELYDALNQEPGVSVTGGAGRPQNI-TIRGMTGNRIAIVRDGIQSADGY---- 110

Query: 133 NMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDP---THH 189
                G +    +      SL +++Q+++  G  S + G     G ++++S  P    +H
Sbjct: 111 -----GAADINDKYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYH 165

Query: 190 FESAVKAGIGESDYS 204
            +  V A +  S  S
Sbjct: 166 RDYYVDAALTYSGIS 180