Pairwise Alignments
Query, 2413 a.a., non-ribosomal peptide synthetase from Vibrio cholerae E7946 ATCC 55056
Subject, 1100 a.a., Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules from Variovorax sp. SCN45
Score = 249 bits (636), Expect = 2e-69
Identities = 263/1019 (25%), Positives = 440/1019 (43%), Gaps = 83/1019 (8%)
Query: 431 PEMMQQSVQQIDAQLGYARRESIQEMPLTPLQQAYLLGRSTQIALGGVAMHEFREYRGHI 490
P +++ + A L +A+R L P AY + ++ RG +
Sbjct: 37 PALVRSADPAARAALSFAQRRQWFLWKLDPDSTAYHIAEGLRL-------------RGAL 83
Query: 491 DTQSLHSRLLYLVEHIPALRT--RIDQEKWI-QWVSPCIALNWQAIDLQHLSREQALLAV 547
D ++L + L+ +LRT R ++ Q V P +AL IDL V
Sbjct: 84 DIEALRAAFQALLARHESLRTVFRAGEDGLAEQVVQPSLALEIPVIDLSDAPEPLRAELV 143
Query: 548 EPVRQQYQQRMHDLTRSPWQICVVQLPIEEQEEFSSIVLTSFDALIVDGRTHALIL---- 603
E + Q+ DL R P ++++ + + EF+ +++ ++ DG + +++
Sbjct: 144 EEAARAANQKPFDLLRGP----LLRVSVIRESEFAHVLVVVMHHIVSDGWSMQILVDEFV 199
Query: 604 ---AALLGSEEPDITQVVQNARDTQSISPQF--ASKKAQDEAYWKSKLHPDCPPPALPWK 658
A+ E ++ + D + Q+ A ++ + AYW+S+L + P LP
Sbjct: 200 AQYRAISQGEAVELPSLPVQYADYAAWQRQWLDAGERERQLAYWRSQLGMEQPVLQLPSD 259
Query: 659 QALETITTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILDVLSYWTTEIGMRV 718
+ R A +++P L R G LL A +L +T + +RV
Sbjct: 260 HPRKAEGGYRAAGHVVELPAALAQGLRRQMQARGATPFMLLLAGFQALLHRYTGQEDIRV 319
Query: 719 GFPVLIPSSNAIDGNESSFVILEHEKSTLSLLSQASKLQREMLE-ALEHLAFSGVDLNRL 777
G PV + +G FV + +S + ++L + E AL A + +L
Sbjct: 320 GVPVANRNRTETEGVIGFFVNTQVLRSPVHGRMGLARLLAQARETALGAQAHQDLPFEQL 379
Query: 778 L--------MNQAPQALVLPVVLTNGLSWKTLNPEDAVTLFDGVT---QTPQVALDIRLT 826
+ M +P V+ L G ++ L +T+ +G + + Q L +
Sbjct: 380 VEALQPERSMGHSPLFQVMFNYLRGG--YEALRNLPGLTM-EGCSLGEKAAQFELTLTAI 436
Query: 827 YDEQKNLIISFDYALAVLETE-----------LIREMLSALHHRLSQITSSASLAAPLEP 875
D + + F YA + E + L++ ++ A + + AAP
Sbjct: 437 EDPEGGIKAVFGYARELFEPDTIARMAGHYLALLQALVDAPEQAVGDVVLRDQAAAPQR- 495
Query: 876 CIDLSHYRFNSDESASHDCDFLAKLAQQLFVRTEDKTAVICGEQTLSYAQLGEQVQRVMW 935
L+ RF +D H +L ++ D A+ CG + L+YAQL E+ R+
Sbjct: 496 --GLNALRF-ADAQPVH------RLIERQVQLRPDAVALTCGARALTYAQLNERANRLAH 546
Query: 936 QLKARGLTTGNVLAICLPRSVEHIVISLASALSGIIWVPIDAASPKERLNYLLENCHADL 995
+L A G + I + R +V LA SG +VP+D P++RL Y+ + L
Sbjct: 547 RLIASGAGPEKKVGIVMERDAGMVVSVLAVLKSGAAYVPLDPEHPQDRLAYMAADSGLSL 606
Query: 996 VVMDKPCEFGNVIAFDALIEPVLFADGVP-DVTPLDQLSRLSQSQQTAYYLYTSGTTGKP 1054
++ + + IA DA I VL D + P ++ AY +YTSG+TGKP
Sbjct: 607 LLTQSSLQ--DRIADDAGIR-VLAIDRIDLSGEPAHDPEVPLHAEHLAYVIYTSGSTGKP 663
Query: 1055 KCVVVNNQATSNVIGQTGQAWHLTSEDVVMSVTPLHHDMSVFDLFATLSFGATLVLPAGH 1114
K V+V ++A S+ I +T+EDV+++VT L D++ +L+ LS GA +VL +
Sbjct: 664 KGVMVRHEALSHFIRSMQATPGMTAEDVLVAVTSLSFDIAALELYLPLSCGARIVLASQE 723
Query: 1115 EEKDALQWNRLIERHQVTIWVSVPAILEMLLSC-TQAGQLHSLRLIAQGGDYIKPATIAQ 1173
+D +L+E T+ S PA +L + A LH + + GG+ ++
Sbjct: 724 TVRDGRALAQLVEESGATLLQSTPAGWRLLRAAGWPAAPLHGFKGLC-GGEALQSDLAED 782
Query: 1174 LRAGSNPPRLISLGGPTETTIWSIWHELTADDVSVIPYGRPLAGNRYFIMDEIQRHVPQG 1233
L L ++ GPTETTIWS + + G +A + ++D + VPQG
Sbjct: 783 LHGLG--VELWNMYGPTETTIWSSAQRVADGHPGI---GEAIAATQLRVLDADLQPVPQG 837
Query: 1234 VVGRIFTSGVNLAQGYLEDGELKQTDFVTVLDEHG-HPVRAFRTGDQGYYRADGNIIFAS 1292
V G ++ GV LA+GYL L F+ D G R +RTGD + DG + + S
Sbjct: 838 VAGELYIGGVGLARGYLHRPGLSAERFLA--DPFGTKGERIYRTGDMVRWSFDGRLQYLS 895
Query: 1293 RINGYVKVRGVRVSLPDIEKQLQTHPALASVVVVDYADTNGDTALAALFSVKPQQSASSQ 1352
R++ +K+RG R+ L +IE QL P + VVV G +A V Q
Sbjct: 896 RVDHQIKIRGFRIELGEIETQLLAQPEVREAVVVAKEGPGGARLVA---YVSLSSDTQPQ 952
Query: 1353 ALREFAKQSLPSSHIPSRFIALEALPLSANGKVDRKQCQAHVQ-RQSISVEPVGQPNQS 1410
L+ ++LP +P+ + L ALPL+ NGKVDRKQ Q Q + EP G ++
Sbjct: 953 LLKARISRALPEYMVPASIMVLPALPLNMNGKVDRKQLPELEQGTQQVHEEPQGDAERA 1011
Score = 92.0 bits (227), Expect = 5e-22
Identities = 119/501 (23%), Positives = 202/501 (40%), Gaps = 54/501 (10%)
Query: 1924 AQQAVLHRKPTSTSFA-------VSEVVESSKAPLSLAQASLWKAMSKYAKFGLTHIFNL 1976
AQQA+L + T+ + V +++A LS AQ W HI
Sbjct: 17 AQQALLASRLKGTAASEDREPALVRSADPAARAALSFAQRRQWFLWKLDPDSTAYHIAE- 75
Query: 1977 PFALKFLDEVNEQAFGEAFHWLLLRHAGLRTHFGL-EDGQPYQHVIAASNIEHYQWFWTS 2035
L+ ++ +A AF LL RH LRT F EDG Q V + +E
Sbjct: 76 --GLRLRGALDIEALRAAFQALLARHESLRTVFRAGEDGLAEQVVQPSLALEIPV---ID 130
Query: 2036 KDNAAQSVARLLAQEA-----EHTFDLSQELPLRLNFVRDEQTGTQYLSLLFHHIVLDEW 2090
+A + + L +EA + FDL + LR++ +R+ + L ++ HHIV D W
Sbjct: 131 LSDAPEPLRAELVEEAARAANQKPFDLLRGPLLRVSVIRESEFA-HVLVVVMHHIVSDGW 189
Query: 2091 SINILMDELAQVYQHSVQGTRPQWQTEPLPFHEFARKQR---SSAFNQTHLNYWLTKFAG 2147
S+ IL+DE Y+ QG + + P+ + ++A QR + + L YW ++ G
Sbjct: 190 SMQILVDEFVAQYRAISQGEAVELPSLPVQYADYAAWQRQWLDAGERERQLAYWRSQL-G 248
Query: 2148 VPWAQPLFAADHPLSNSTGVDLGEGGWVE----IKLPKSTMVSLYQLAKARHASLFNVMY 2203
+ +DHP EGG+ ++LP + L + +AR A+ F ++
Sbjct: 249 MEQPVLQLPSDHPRK-------AEGGYRAAGHVVELPAALAQGLRRQMQARGATPFMLLL 301
Query: 2204 AAISASVHCLGAPEKLLVGTPASGRLDAEFFDTVGYFTTMGVQLVDFTKVQTVWQLIEQV 2263
A A +H E + VG P + R E +G+F V + +L+ Q
Sbjct: 302 AGFQALLHRYTGQEDIRVGVPVANRNRTETEGVIGFFVNTQVLRSPVHGRMGLARLLAQA 361
Query: 2264 KNSINQSMPYTDIPIDLIEEGLKGVEHETEGHMFEVFIQLHAKNKLHGELLLTEGHAIRF 2323
+ + + + D+P + + E L+ +F+V N L G A+R
Sbjct: 362 RETALGAQAHQDLPFEQLVEALQPERSMGHSPLFQVMF-----NYLRGGY-----EALRN 411
Query: 2324 QQVDPDKSESGLGL-----QFEILEERIEQKQ-TLRVMMSYMSKHYSPAQVALLTKVTSG 2377
P + G L QFE+ IE + ++ + Y + + P +A +
Sbjct: 412 L---PGLTMEGCSLGEKAAQFELTLTAIEDPEGGIKAVFGYARELFEPDTIARMAGHYLA 468
Query: 2378 MFERFSDCIAQDIALPTLKKQ 2398
+ + D Q + L+ Q
Sbjct: 469 LLQALVDAPEQAVGDVVLRDQ 489
Score = 47.8 bits (112), Expect = 1e-08
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 1862 EECILAEFRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLLSEQGIELHINDMFSFPNAK 1921
E + + LGV + D FFD GGHSL+A +++ R+ S ++ I D+F P K
Sbjct: 1009 ERALAVIWAQVLGVERVGRHDSFFDLGGHSLLAVQMVARVQSAMRADIAIQDVFRHPVLK 1068
Query: 1922 QLA 1924
+A
Sbjct: 1069 DMA 1071
Score = 32.0 bits (71), Expect = 6e-04
Identities = 50/206 (24%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 1421 ASLSEFEQRVWRQHQRHGDGRNQY-ATAYRLSGKVNIARLITALSQLPNHFPVLNRRYVL 1479
A+LS ++R W + D + A RL G ++I L A L L +
Sbjct: 49 AALSFAQRRQWFLWKLDPDSTAYHIAEGLRLRGALDIEALRAAFQALLARHESLRTVFRA 108
Query: 1480 DEASGLTLYSAKPTPLEIHFEHVESMD-------EAFEHLVRWQNQ-PMDLAKQATLSFC 1531
E GL +P+ L + ++ D E E R NQ P DL + L
Sbjct: 109 GE-DGLAEQVVQPS-LALEIPVIDLSDAPEPLRAELVEEAARAANQKPFDLLRGPLLRVS 166
Query: 1532 LLSLGSEERVLGVISHQIISEQWDWRRVFECVTNGYNQIACDIDPVMEGEDLSLGFTPVM 1591
++ VL V+ H I+S+ W + + + Y I+ +GE + L PV
Sbjct: 167 VIRESEFAHVLVVVMHHIVSDGWSMQILVDEFVAQYRAIS-------QGEAVELPSLPV- 218
Query: 1592 PQTPLSQALLPWLQPASHATWIEQSL 1617
Q A +A W Q L
Sbjct: 219 -------------QYADYAAWQRQWL 231