Pairwise Alignments
Query, 2413 a.a., non-ribosomal peptide synthetase from Vibrio cholerae E7946 ATCC 55056
Subject, 2563 a.a., peptide synthetase, siderophore biosynthesis protein from Agrobacterium fabrum C58
Score = 213 bits (542), Expect = 3e-58
Identities = 152/511 (29%), Positives = 245/511 (47%), Gaps = 32/511 (6%)
Query: 895 DFLAKLAQQLFVRTEDKTAVICGEQTLSYAQLGEQVQRVMWQLKARGLTTGNV-----LA 949
DF + L + VR AV CG++ S+ L E RV L+ R GN +A
Sbjct: 482 DFASLLEETAQVRGSS-VAVRCGDRQYSHGDLNEAANRVASGLRDR---IGNSKPHPRIA 537
Query: 950 ICLPRSVEHIVISLASALSGIIWVPIDAASPKERLNYLLENCHADLVVMDKPCEFGNVIA 1009
ICLPRS ++ LA G +VP+D P ER +LE+C D++++ + G A
Sbjct: 538 ICLPRSENLVIAILAVLKLGGHYVPLDPGHPAERRALILEDCKPDIILISE----GEDTA 593
Query: 1010 FDA---LIEPVLFADGVPDVTPLDQLSRLSQSQQTAYYLYTSGTTGKPKCVVVNNQATSN 1066
+ IEP+L A G R + AY +YTSG+TG+PK V + ++ N
Sbjct: 594 YPCGCMAIEPLLRATG-----SFGNPHRETLPDDLAYIIYTSGSTGRPKGVPIRQKSLVN 648
Query: 1067 VIGQTGQAWHLTSEDVVMSVTPLHHDMSVFDLFATLSFGATLVLPAGHEEKDALQWNRLI 1126
++ + +++ED ++VT D++ +L L G L++ + D + + LI
Sbjct: 649 LLTSMARRPGMSAEDRFLAVTTPAFDIATLELLMPLMVGGLLIIAEADDIYDDMALSELI 708
Query: 1127 ERHQVTIWVSVPAILEMLLSCTQAGQLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISL 1186
H T+ + PA ++ R++ GG+ ++P +L A L +L
Sbjct: 709 RNHSATMMQATPATWRLMADADWKAPA-GFRMLC-GGEALEPGLARRLLAAGG--ELWNL 764
Query: 1187 GGPTETTIWSIWHELTAD--DVSVIPYGRPLAGNRYFIMDEIQRHVPQGVVGRIFTSGVN 1244
GPTETTIWS + A+ ++ +P G P+A + ++D+ VP GVVG ++ G
Sbjct: 765 YGPTETTIWSTCTRICAEHLELPALPVGEPIANTQLHLLDDALMPVPAGVVGELYIGGEG 824
Query: 1245 LAQGYLEDGELKQTDFV----TVLDEHGHPVRAFRTGDQGYYRADGNIIFASRINGYVKV 1300
L+ GY +L FV + G R +RTGD A G++++ R + VK+
Sbjct: 825 LSPGYFNRDDLTSRAFVEGPAAGSNGGGERSRLYRTGDLMRRSAAGHLLYVGRADFQVKL 884
Query: 1301 RGVRVSLPDIEKQLQTHPALASVVVVDYADTNGDTALAALFSVKPQQSASSQALREFAKQ 1360
RG R+ L +IE L P++ VV + D G L A + + ALR
Sbjct: 885 RGFRIELSEIEAILAAQPSIEQAVVALFQDEEGSGTLVA-YCRRGTSPVDEDALRAALAS 943
Query: 1361 SLPSSHIPSRFIALEALPLSANGKVDRKQCQ 1391
LPS +P+ ++ ++ PL+ANGK+DRK+ +
Sbjct: 944 QLPSYMLPAAYVWMDRFPLNANGKIDRKRLE 974
Score = 143 bits (361), Expect = 3e-37
Identities = 125/486 (25%), Positives = 216/486 (44%), Gaps = 35/486 (7%)
Query: 913 AVICGEQTLSYAQLGEQVQRVMWQLKARGLTTGNVLAICLPRSVEHIVISLASALSGIIW 972
AV +++LSYA+L + R+ L A G+ G + I L RSVE +V LA +G +
Sbjct: 1551 AVTDQDRSLSYAELDWRADRLASGLVAAGIGRGKRVGIRLERSVELVVAILAVLRTGAAY 1610
Query: 973 VPIDAASPKERLNYLLENCHADLVVMDKPCEFGNVIAFDALIEPVLFADGVPDVTPLDQL 1032
VP+D P +R+ ++ + L+++ + + + P + + P
Sbjct: 1611 VPLDPRYPADRIEFIAADADLALILVTTENDISTIGQNFRCMTPGMVENLAGGAVP---- 1666
Query: 1033 SRLSQSQQTAYYLYTSGTTGKPKCVVVNNQATSNVIGQTGQAWHLTSEDV---VMSVTPL 1089
+ ++ AY +YTSG+TG+PK V + ++ N + H ++D V++ T +
Sbjct: 1667 TPVTSGADLAYLIYTSGSTGRPKGVAIEHR---NAVAFMQWCMHAFTKDQLSGVLASTSI 1723
Query: 1090 HHDMSVFDLFATLSFGATLVLPAGHEEKDALQWNRLIERHQVTIWVSVPAILEMLLSCTQ 1149
D+S+F++FATL+ G + + D + +VT+ +VP + LL
Sbjct: 1724 CFDLSIFEIFATLAAGGRIFM-----VDDLFAFPSAPFAGEVTLVNTVPTPMSELLKLGP 1778
Query: 1150 AGQLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISLGGPTETTIWSIWHELTADDVSVI 1209
Q +++ + G+ + +A++ A L +L GP+E T +S V+ +
Sbjct: 1779 LPQ--NVKTVCLAGEPLPRELVARIYANDQVECLYNLYGPSEDTTYS--------TVAPV 1828
Query: 1210 P-------YGRPLAGNRYFIMDEIQRHVPQGVVGRIFTSGVNLAQGYL-EDGELKQTDFV 1261
P G P+A R +++D VP GV G +F SG LA+GY G+ +
Sbjct: 1829 PPSGEWFGIGVPIANTRAYVLDGEMNEVPVGVPGELFLSGSGLARGYWNRPGQTAERFLP 1888
Query: 1262 TVLDEHGHPVRAFRTGDQGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQTHPALA 1321
+ ++TGD R DG + + R + +K+ G R+ +IE L +
Sbjct: 1889 NPFADCSQHRVMYQTGDIVRRRDDGGLDYMGRADRQLKLNGFRIEPGEIEAVLLQQEGVH 1948
Query: 1322 SVVVVDYADTNGDTALAALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEALPLSA 1381
V + D LA + P + L +Q LP IP L+ALP
Sbjct: 1949 EAVAGLWRDAANHPRLAMWIAGDPALEITK--LVATLRQRLPEHFIPVLATRLDALPRLP 2006
Query: 1382 NGKVDR 1387
NGK+DR
Sbjct: 2007 NGKLDR 2012
Score = 121 bits (303), Expect = 2e-30
Identities = 106/394 (26%), Positives = 169/394 (42%), Gaps = 24/394 (6%)
Query: 1862 EECILAEFRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLLSEQGIELHINDMFSFPNAK 1921
E+ + A +R LG ++ +D+FF GGHSL+ATR++ RL + I+L + F P
Sbjct: 993 EQIVAAIWRELLGAEKIGRDDNFFTVGGHSLLATRMLARLRASFAIDLPLRTFFERPRLA 1052
Query: 1922 QLAQQ-----AVLHRKPTSTSFAVSEVVESSKAPLSLAQASLWKAMSKYAKFGLTHIFNL 1976
A A+ R+P + S A+S+ + PLS AQ W + ++N+
Sbjct: 1053 DFAGAVDALVAMTERRPEAVSSALSKREHTGPTPLSHAQNRQWALAQLEPD---SPLYNI 1109
Query: 1977 PFALKFLDEVNEQAFGEAFHWLLLRHAGLRTHFGLEDGQPYQHVIAASNIEHYQWFWTSK 2036
PFALK ++ + A R LR+ F DG+P+ + +
Sbjct: 1110 PFALKIRGALDFEILSHALELTAQRQDTLRSRFVSVDGKPF-----VETDPEMIFKIVPE 1164
Query: 2037 DNAAQSVARLLAQEAEHTFDLSQELPLRLNFVRDEQTGTQYLSLLF--HHIVLDEWSINI 2094
+ + + L A FDL+ LR++ R TG Q LLF HHI+ D S I
Sbjct: 1165 EIGDRELEAALLDCARRPFDLAVAPLLRIHAFR---TGPQDHVLLFLLHHIIGDALSAEI 1221
Query: 2095 LMDELAQVYQHSVQGTRPQWQTEPLPFHEFARKQRSSAFNQTHLNYWLTKFAGVPWAQPL 2154
L++++A Y + P PL + +FA QR ++YW AG P PL
Sbjct: 1222 LLNDVATFYASLSKKEAPPNGALPLQYSDFAIWQREQD-TTNEVDYWRRTLAGAP---PL 1277
Query: 2155 FAADHPLSNSTGVDLGEGGWVEIKLPKSTMVSLYQLAKARHASLFNVMYAAISASVHCLG 2214
+ G + L + L QL + A+LF M A S + +
Sbjct: 1278 LELPTDFVR-PAIQGFSGESIRFSLNADLLARLRQLCDQQGATLFMGMLTAFSTLLQRVS 1336
Query: 2215 APEKLLVGTPASGRLDAEFFDTVGYF-TTMGVQL 2247
+++GTP S R + + +G F T+ ++L
Sbjct: 1337 GMRDIVIGTPVSERFHPDLENVIGMFANTLAIRL 1370
Score = 98.2 bits (243), Expect = 2e-23
Identities = 89/371 (23%), Positives = 164/371 (44%), Gaps = 20/371 (5%)
Query: 1939 AVSEVVESSKAPLSLAQASLWKAMSKYAKFGLTHIFNLPFALKFLDEVNEQAFGEAFHWL 1998
A + E LS AQ +W G +++P A++ ++ F +
Sbjct: 20 AGQQASEKKNFRLSHAQERIWFVEQMQPGTGA---YSIPVAIRLEGPLDRDRLRICFDIV 76
Query: 1999 LLRHAGLRTHFGLEDGQPYQHVIAASNIEHYQWFWTSKDNAAQSVARLLAQEAEHTFDLS 2058
+ RH LRT F ++DG+P+Q VI + + + D AA+ VA + + A+ F+LS
Sbjct: 77 VQRHESLRTVFEVQDGEPFQ-VIVSQTTADFSFHEPGDDEAARDVA--IGRFAQEPFNLS 133
Query: 2059 QELPLRLNFVR---DEQTGTQYLSLLFHHIVLDEWSINILMDELAQVYQHSVQGTRPQWQ 2115
Q R+ DE T L ++ HHI+ D S+ IL+DE+ ++Y + Q
Sbjct: 134 QGPLFRVGLFSVAPDEHT----LVMVIHHIISDYASLQILIDEVYRLYSAAEAPAIGQLP 189
Query: 2116 TEPLPFHEFARKQRS-SAFNQTHLNYWLTKFAGVPWAQPL-FAADHPLSNSTGVDLGEGG 2173
+ + ++A QR+ +A ++YW + P L F P++ S +G
Sbjct: 190 ALDIQYRDYAEWQRNGTAALSGQIDYWREQLRDAPLLLQLPFDFARPVTQSF-----QGA 244
Query: 2174 WVEIKLPKSTMVSLYQLAKARHASLFNVMYAAISASVHCLGAPEKLLVGTPASGRLDAEF 2233
+ +L + ++ LAK+R + F V+ AA + L + + +GT AS R A+
Sbjct: 245 RHKFRLGPALSSAVKDLAKSRKLTTFMVLLAAYQILLARLSRSDDICIGTTASNRNRAQT 304
Query: 2234 FDTVGYFTTMGVQLVDFTKVQTVWQLIEQVKNSINQSMPYTDIPIDLIEEGLKGVEHETE 2293
+ +G F V T L+++V+++ +++ D+P + + + L
Sbjct: 305 RNLIGLFVNNLVLRTRLQPNDTFDTLLDRVRDTTLEALSNQDVPFEQVVDALNVERDIGH 364
Query: 2294 GHMFEVFIQLH 2304
+F+ LH
Sbjct: 365 NALFQSTFVLH 375
Score = 52.0 bits (123), Expect = 1e-09
Identities = 96/436 (22%), Positives = 176/436 (40%), Gaps = 43/436 (9%)
Query: 1844 AALAESELELSAVNSSAVEECILAE-FRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLL 1902
AA E E +++ + +E +LA+ ++ LG ++ D+FF GG S++A +++ +
Sbjct: 2019 AAYGERATETASLLND--QEDVLAQIWQGLLGCGDIRRNDNFFSLGGDSILAIQLVSQ-A 2075
Query: 1903 SEQGIELHINDMFSFPNAKQLAQQAVLHRKPTSTSFAVSEVVESSKAPLSLAQASLWKAM 1962
++G+++ D+F P LA+ V H + T T V + A ++ +
Sbjct: 2076 RQKGLKMTPRDVFLHPTLASLAE--VTHVESTVT-------VGTGHADDEATLGAIQHWL 2126
Query: 1963 SKYAKFGLTHIFNLPFALKFLDEVNEQAFGEAFHWLLLRHAGLRTHFGLEDGQPYQHVIA 2022
L H +N LK ++ +A LL H LR F ++GQ Q
Sbjct: 2127 LDQDLPDLAH-WNQGLILKLTRSLDPDRLEKAISRLLEEHQSLRARFLRKNGQWQQKFAP 2185
Query: 2023 ASNIEHYQWFWTSKDNAAQSVARLLAQEAEHTFDLSQELPLRLNFVRDEQTGTQYLSLLF 2082
S + Q + +N AR L FDL PL + G+ L L
Sbjct: 2186 LSAMPPMQQLAATDENDVTDFARKL----HAGFDLGAG-PLFGAILATLPDGSGRLILAA 2240
Query: 2083 HHIVLDEWSINILMDELAQVYQ-----HSVQGTRPQWQTEPLPFHEFARKQRSSAFNQTH 2137
HH+++D S +++ ++ + Y S W +R RS+ F+
Sbjct: 2241 HHLIVDGVSWRMIVADIERHYLEASTIRSGAVAAGSWN---------SRLSRSALFDGEE 2291
Query: 2138 LNYWLTKFAGVPWAQPLFAADHPLSNSTGVDLGEGGWVEIKLPKSTMVSLYQLAKARHAS 2197
YW A PL D+ ++T D + + ++T L + + +
Sbjct: 2292 -EYWRGVCEEDVRALPL---DNESGSNTQSDAVT--YRQTIDAETTRQLLRDVPECFSIA 2345
Query: 2198 LFNVMYAAISASVHCLGAPEKLLVGTPASGRL----DAEFFDTVGYFTTMGVQLVDFTKV 2253
V+ AA+ ++ +L + + GRL D + +TVG+ T + L D
Sbjct: 2346 SNEVLVAALYLTLRQWSGQPRLRLEMESHGRLNLFEDIDVSETVGWLTALYPVLFDTPDD 2405
Query: 2254 QTVWQLIEQVKNSINQ 2269
T +L+ VK+++ +
Sbjct: 2406 ATPDRLLLDVKDTLRR 2421
Score = 49.7 bits (117), Expect = 7e-09
Identities = 98/501 (19%), Positives = 183/501 (36%), Gaps = 35/501 (6%)
Query: 37 LNRQALTEAVRALYAKHPMLRLAI-TKDGQQKILPLSTFHQLKVDDLSQWKPDEVESFVH 95
L+R L + +H LR +DG+ P D S +P + E+
Sbjct: 64 LDRDRLRICFDIVVQRHESLRTVFEVQDGE----PFQVIVSQTTADFSFHEPGDDEAARD 119
Query: 96 TKRQRMTHQMLDLTQGNPIEISLTLLPEGKHRLHIDADMIACDAQSFRLLVDDLTSLYLE 155
R + +L+QG + L + +H L + I D S ++L+D++ LY
Sbjct: 120 VAIGRFAQEPFNLSQGPLFRVGLFSVAPDEHTLVMVIHHIISDYASLQILIDEVYRLYSA 179
Query: 156 AIEHRLEIIESDVVTFFQYLDAQQADRALAKRKEVDKKWWQERLATIPAEPSLPYQPVPT 215
A + + + + + Y + Q+ A A ++D +W+E+L P LP+
Sbjct: 180 AEAPAIGQLPALDIQYRDYAEWQRNGTA-ALSGQID--YWREQLRDAPLLLQLPFDFARP 236
Query: 216 DAVSANSQRFAHWFTPVERKGLAEVARQHHLTLTQLTLALFSQVIANACQERQFRLNVPT 275
S R P + ++A+ LT + LA + ++A + +
Sbjct: 237 VTQSFQGARHKFRLGPALSSAVKDLAKSRKLTTFMVLLAAYQILLARLSRSDDICIGTTA 296
Query: 276 FHRGNRSLDIEHTIGDFSNLLIFSADVGTTQTLLSLCQQTANQLHQLLRHES------YS 329
+R NR+ + IG F N L+ + T +L + + + L ++
Sbjct: 297 SNR-NRA-QTRNLIGLFVNNLVLRTRLQPNDTFDTLLDRVRDTTLEALSNQDVPFEQVVD 354
Query: 330 GVSVMRDLSRKQGGVQRSPIVFTSGMEMRDEEIFSDHVTQHLGRMNWVISQGAQVTLDAQ 389
++V RD+ + SG +I + G + +S LD
Sbjct: 355 ALNVERDIGHNALFQSTFVLHNASGAAFDLGDIKVTPIALDSGASRFDLS------LDMH 408
Query: 390 IAPAYEGILLNWDVRMENFADKDITALFAHYVDLIRCVALHPEMMQQSVQQID----AQL 445
EG ++ E F + ++ A+++ L+ + +P + +D A +
Sbjct: 409 EGRGNEGFSGVFEFNTELFLPETVSRFSAYFLRLLGGLVSNPGGRIAEIDLLDKTEHAAI 468
Query: 446 GYARRESIQEMPLTPLQQAYLLGRSTQIALGGVAMHEFREYRGHIDTQSLHSRLLYLVEH 505
A R +I PL A LL + Q+ VA+ H D +R+
Sbjct: 469 ATANRTTI-AFPLRDF--ASLLEETAQVRGSSVAVRCGDRQYSHGDLNEAANRV------ 519
Query: 506 IPALRTRIDQEKWIQWVSPCI 526
LR RI K ++ C+
Sbjct: 520 ASGLRDRIGNSKPHPRIAICL 540
Score = 46.6 bits (109), Expect = 6e-08
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 35 QALNRQALTEAVRALYAKHPMLRLA-ITKDGQ--QKILPLSTFHQLKVDDLSQWKPDEVE 91
++L+ L +A+ L +H LR + K+GQ QK PLS ++ L+ ++V
Sbjct: 2147 RSLDPDRLEKAISRLLEEHQSLRARFLRKNGQWQQKFAPLSAMPPMQ--QLAATDENDVT 2204
Query: 92 SFVHTKRQRMTHQMLDLTQGNPIEISLTLLPEGKHRLHIDADMIACDAQSFRLLVDDLTS 151
F R H DL G L LP+G RL + A + D S+R++V D+
Sbjct: 2205 DFA-----RKLHAGFDLGAGPLFGAILATLPDGSGRLILAAHHLIVDGVSWRMIVADIER 2259
Query: 152 LYLEA 156
YLEA
Sbjct: 2260 HYLEA 2264