Pairwise Alignments

Query, 377 a.a., flagellar basal-body protein from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 33/390 (8%)

Query: 9   ISALWMMLQLPS-----AHAAWYEVTGSAAIVSSE-EVARLHALEDALYKAVNFAGADIG 62
           IS   +++ LPS     A A W +   + A+  +E    R  A+++A+  A   +G+ I 
Sbjct: 11  ISLTALLVLLPSLVTQHAWAQWVQGEATMALAGAELSDVRTSAIQNAIADAAFRSGSTIS 70

Query: 63  SISNLMPLLESDRREYLFANHEVRYILIEERKAINNVMYVRTRIDIYPSATACHVEQYKK 122
           +    +  L    +  + +   V+ + I       + + V   ++I P    C       
Sbjct: 71  AQDITVDGLLLSSKAEIRSQGRVQRVEIISETLKEDALTVVVNVNITPLFN-CTNNGLAH 129

Query: 123 TMLIGNIDLASPQQAVMGQIYQVGDD----FAQVINRRLEQESRSFVSVG---------T 169
            +L+    L SPQQA  G +Y  G      FAQ +N   +    S + V          +
Sbjct: 130 RILVTEFPLTSPQQAATGMLYSFGSHVSQRFAQQLNGLYQSGDVSQIPVSLINANTWLTS 189

Query: 170 TQYDIDPKAPERIKMIAQDAGAQYIMGGMITDLTATIEQKTLQDDI-------INRQFAM 222
           +  DID  A      +  + G Q+++ G + D++   EQ +    +       + R F +
Sbjct: 190 SLSDIDLTAMSTF--LRSEYGQQFVVFGFVKDISL-FEQVSQATSVFETDGVALRRNFTV 246

Query: 223 EISVFDGKTGNEVMTRTYREVARWPFPKTSQIDTRSARFWASTYGEMMLRVSRNIMLDLE 282
           ++ V D      +   +Y   A WPF +   +D  ++  W S +G M+L      + D+ 
Sbjct: 247 QVYVLDTFKAKVIFNDSYHSEADWPFSQHYSVDMSNSLLWRSDFGRMVLNTVHAAITDIH 306

Query: 283 SEISCKITLPQIVAKFGTTATMDLGRIHGVKQGDKLSLWHTGAFIDQQGLPRNKVTQSEI 342
           + + C+ T  Q++        +DLG+  G+  GD+ SL    A +   GL R     S  
Sbjct: 307 AALQCETTYAQVIDISPDYIAIDLGKNSGLAVGDEFSLVKQRA-LPALGLSRKPGLFSTK 365

Query: 343 TLTVSRVYEHEAELTVDQPEL-AYSIQIGD 371
           TLT+ +VYE   ++++ + E  + S+ IGD
Sbjct: 366 TLTL-QVYEVSDDVSLLKAESGSDSVHIGD 394