Pairwise Alignments

Query, 255 a.a., flagella basal body P-ring formation protein FlgA from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 6/178 (3%)

Query: 80  AANIDDRLFATDCPEPLTTNSSSSNGSAANITVLVECKPDNWRVYVPVRLTITIPLITAA 139
           AA I   L A   P    + SS +  +AA    +    P    V  P     T  +  AA
Sbjct: 6   AAGIWTMLCAVAAPAMAQSISSLAQQAAAGREEVEP--PRAAPVRPPTEAAPTARIPVAA 63

Query: 140 TPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPEN-VIGAKIKKNIRVGDVIEQN---DVC 195
             L  G +ISA  ++   V      R G +   + V+G   ++ I  G  +  N   DV 
Sbjct: 64  VTLYPGDVISAGMLSQREVSDAVLDRGGIALQSSAVVGKAARRVIAAGQPVPLNALTDVT 123

Query: 196 IVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVKNDKSNRIIDAQVSGVGEVTV 253
           +V +  +  I+    G++I+  G  +  G  G  I++KN  S +II  +V+G G V V
Sbjct: 124 LVTKGVATRIQLKDGGLAISGYGMPLDSGAAGATIRLKNMDSGQIIVGEVAGDGTVWV 181