Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  302 bits (773), Expect = 8e-87
 Identities = 153/308 (49%), Positives = 214/308 (69%), Gaps = 4/308 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M GILD+V+QRTQLVG+NRLE+L FRL GRQ + INVFKV+EVLQ PKLT MP  H  V 
Sbjct: 1   MAGILDTVDQRTQLVGENRLEILMFRLFGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVC 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GV ++RGQT+ VID+S A+G RP      S +++ E+NR++QAFLV  V+RI+NM WEAI
Sbjct: 61  GVVNLRGQTLPVIDLSQAIGMRPLVPGPNSTIIVTEYNRSVQAFLVGGVDRIVNMNWEAI 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEF 180
           LPPP   G+ +YLTA++ +D++LVEIIDVEK+LAEI P N  +     E++     E+  
Sbjct: 121 LPPPTSAGRQHYLTAISKVDDQLVEIIDVEKVLAEIVPYNAKVSR---EKLEDPVLERAR 177

Query: 181 VRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPI-SNQISLVIS 239
            R +L+ DDS+VA  Q++  +  +G ++    DG  A   L      G + ++++ ++ +
Sbjct: 178 GREVLLVDDSNVALSQLRDTLGQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFT 237

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELG 299
           D EMPEMDGY LT EIR    L+ LYV+LH+SLSG FN +MV++VG + F++KF PD+L 
Sbjct: 238 DAEMPEMDGYRLTTEIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLV 297

Query: 300 NAVKAALV 307
           + V+  L+
Sbjct: 298 DVVRQRLM 305