Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. DMC3

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 20/251 (7%)

Query: 59  VKGVAHI--RGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMR 116
           V+G  H    GQ V ++  S  +  RP +  D + + +    R  +A    +VER +  R
Sbjct: 510 VEGRQHFWHEGQHVGLVAASQLLN-RPASQNDGATLKVVVI-REREAIYGVAVERFVGER 567

Query: 117 WEAILPPPNGTGKSNYLTAVTNIDN-ELVEIIDVEKILAEITPVNEDMDSSIGEQIAQV- 174
              +LP     GK   ++A   +D+  +V I+DVE +L  +  +   +++   E+IA+  
Sbjct: 568 TLVVLPLDERLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKL---LNTGRLERIARHG 624

Query: 175 EQEKEFVR-RILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQ 233
            Q  E  R R+L+ DDS   R+  ++ + + G++V    DG D +  L         S  
Sbjct: 625 NQAAEAARKRVLVVDDSLTVRELQRKLLLNRGYDVAVAVDGMDGWNALR--------SEN 676

Query: 234 ISLVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAK- 292
             L+I+DI+MP MDG  L   +RR N L+ L V++ S      ++      GA+ ++AK 
Sbjct: 677 FDLLITDIDMPRMDGIELVTLLRRDNRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKA 736

Query: 293 -FNPDELGNAV 302
            F+ D L +AV
Sbjct: 737 SFHDDALLDAV 747