Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

 Score =  265 bits (676), Expect = 1e-75
 Identities = 140/312 (44%), Positives = 204/312 (65%), Gaps = 11/312 (3%)

Query: 2   TGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKG 61
           + +L SV+QRT+LVG+NRLELL F+L  R  + +NVFK+KEV+  PKL  MP  H  +KG
Sbjct: 3   SSVLSSVDQRTKLVGENRLELLMFQLGTRHIFAMNVFKIKEVINVPKLNIMPGSHHNLKG 62

Query: 62  VAHIRGQTVSVIDMSLAVGGR-PTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           V + RG ++ +ID+  A+  R   T      V+I E+NR++Q F++  V+ I+N  W  I
Sbjct: 63  VMNYRGSSIPIIDLRQAIKMRGAATQATAKNVIITEYNRSVQGFIIGEVKNIVNTSWGTI 122

Query: 121 LPPPNGTGKSNYLTAVTNID----NELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQ 176
            PPP+G GKSNYLTA+T ++     ELVEIIDVEK+LAEI     D D+SI E++   + 
Sbjct: 123 QPPPSGIGKSNYLTAITQVNVEGKQELVEIIDVEKVLAEII----DYDTSISEEVLDKDI 178

Query: 177 EKEFV-RRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGP-ISNQI 234
              F+ +++LI DDS  ARKQ++  +E +G  ++  K+G  A   L +   EG   +++I
Sbjct: 179 VNHFLGKKVLIVDDSGTARKQMKDTLEQLGITIIERKNGAQALALLKKWADEGKNPTDEI 238

Query: 235 SLVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFN 294
            L+ +D EMPEMDGY LT+E+R    + +L++ L++SLSG FN AMVE+VG + FI+KF 
Sbjct: 239 LLMFTDAEMPEMDGYRLTSEVRNDPRMSNLFIALNTSLSGSFNDAMVEKVGCDRFISKFQ 298

Query: 295 PDELGNAVKAAL 306
           PD L +  +  L
Sbjct: 299 PDMLVDVAQQRL 310