Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., flagellar hook capping protein from Rhodanobacter sp000427505 FW510-R12

 Score =  129 bits (325), Expect = 3e-35
 Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 9/200 (4%)

Query: 34  KSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSN 93
           K+L Q DFLSLLT+Q+  QDP KP  + QM++Q+A  + V     + T F+ L+ SM  N
Sbjct: 20  KTLSQADFLSLLTQQMRNQDPTKPTDSSQMVSQLAQISQVSATQALQTSFDDLSKSMQGN 79

Query: 94  QALQASSLVGRDVLVPGAAGMKKPDGGMAAMVKLPQSIDNLFIRIENEAGQLVRTFDVGA 153
           Q LQAS +VGR+V+VP AAG  + DGG+   V +P     + ++I +  G ++RT  +G 
Sbjct: 80  QILQASGMVGRNVVVPSAAGTLR-DGGIDGAVNVPDGRGQVLVKINDTQGNVLRTISLGT 138

Query: 154 KSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVSTYANVNSVLLG-KGDGN 212
             +G  R  WDG   +G  LP G Y + A      ++    V+TYA+     +G  G   
Sbjct: 139 PPAGLARFHWDGMGDDGRALPAGTYGLAA------QAGNTAVATYASGKVTGVGMTGSDG 192

Query: 213 VLLNLAGFDAPVRLAEVLEV 232
           V L++ GF   + L++V ++
Sbjct: 193 VYLDVDGFGGAL-LSQVAQI 211