Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., Flagellar basal-body rod modification protein FlgD from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 3/79 (3%)

Query: 35  SLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSNQ 94
           +L  EDFL +L  QL  QDP KP+ N Q +AQMA F  ++   ++N++ E+L   +T+  
Sbjct: 18  NLGMEDFLKILLTQLNYQDPLKPMDNQQFMAQMAQFTNLEQTQQLNSKIETL---ITNQA 74

Query: 95  ALQASSLVGRDVLVPGAAG 113
           ALQ+  L+G+ V +  A+G
Sbjct: 75  ALQSVGLIGKTVDLNTASG 93