Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Flagellar basal-body rod modification protein FlgD from Sphingobium sp. HT1-2

 Score =  107 bits (268), Expect = 1e-28
 Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%)

Query: 31  TGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSM 90
           TG  ++ Q  FL+LLT Q+  QDPF+PV N +M++QMA+     GI +MN   +SL S +
Sbjct: 24  TGSATMDQSSFLTLLTAQMQYQDPFEPVDNTEMVSQMATITQSTGIAEMNQSLKSLASEL 83

Query: 91  TSNQALQASSLVGRDVLVPGAAGMKKPDGGMAAMVKLPQSIDNLFIRIENEAGQLVRTFD 150
           +  +   A+S +G+ +LV     +    G  A  + L  + D + + + +  G +V++ D
Sbjct: 84  SGTRLGDAASWIGKSMLVQSNVAVPDSSGYYAGQITLSGASDAVSVDLVDGDGNVVKSID 143

Query: 151 VGAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVSTYANVNSVLL-GKG 209
           +GA+S+G+    WDGKD  G  +     +VK +G         +V+T+A + +V     G
Sbjct: 144 LGAQSAGEVAFYWDGKDDAGETVSSSALQVKVNG-----GTTSQVATWATIAAVQSPADG 198

Query: 210 DGNVLLNLAGFDAP 223
             + L+   G  AP
Sbjct: 199 SSSKLITALGSFAP 212