Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., hook formation protein from Agrobacterium fabrum C58

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 35  SLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSNQ 94
           SL  + FL LL  Q+  QDP  P+   Q ++Q+ASF+ V+   K NT    L S + +  
Sbjct: 28  SLNYDSFLKLLIAQMKNQDPTSPMDAGQQMSQLASFSQVEQTIKTNTH---LKSMLQAEA 84

Query: 95  ALQASSLVGRDVL 107
             +AS LVG+ V+
Sbjct: 85  LTRASDLVGKTVM 97