Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Flagellar hook protein FlgE from Xanthobacter sp. DMC5

 Score =  138 bits (348), Expect = 3e-37
 Identities = 125/439 (28%), Positives = 203/439 (46%), Gaps = 32/439 (7%)

Query: 1   MSYVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQA 60
           M   S+SG++A    L T S+NIANA T G+K +  +F  +   +  T  ++        
Sbjct: 6   MLRTSVSGMTAQSNLLGTVSDNIANAGTAGYKRADTQFSSLLLETGGTEYQSGSVNTDVR 65

Query: 61  AKVAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSF-MVT 119
             ++QQ   G+  YT++  DL + G+GFF V        Q +LTR G+F +D ++  +V 
Sbjct: 66  YAISQQ---GALNYTSSSTDLAVQGSGFFLVTDPS---GQTQLTRAGSFQVDASTGNLVN 119

Query: 120 ANDEFLLGYEVNP-DTGDVLSYEPKPINIPPQFGKPKQTANID--LGANLPANGDLKD-P 175
           +    L+GY+V+  D   VL+     + I  Q  K   T + +    ANLP+N  +   P
Sbjct: 120 SAGLTLMGYDVSAGDPNVVLNGTAGLVPINLQNTKLAATPSTEGTFAANLPSNAAVAAAP 179

Query: 176 ALFDITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINV 235
                    +++  +S   YD++G    L  Y  K     +TWQ    V D+ G  P   
Sbjct: 180 TAGANVAGASFSEKSSLVAYDNLGNAVTLDLYLTKTAASPDTWQL--AVYDRAGA-PATG 236

Query: 236 VGGDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDLNGADVNQTLSFSL 295
               A+ P      T+ F+  G L+S N+    V             NGA    TL+  L
Sbjct: 237 TFPYASGPLS--SQTLSFDATGKLASGNSISLAVP------------NGA----TLTLDL 278

Query: 296 DSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQ 355
              +Q AAP+       +G     ++     ++G+V AT +NG  + + R+ L  V +  
Sbjct: 279 AGMSQLAAPYTPFTASVNGNAPSAISDFSIAKDGTVYATDANGRKSAIYRIPLGTVQSAD 338

Query: 356 GLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQA 415
            L+   G  +  T  SGA   G  N+G  G++ +G+ EQSN+DM  EL  +I AQR++ A
Sbjct: 339 RLEPLTGNAYTTTLESGAIQIGFPNEGGVGTLLSGATEQSNVDMASELTRMIVAQRDYTA 398

Query: 416 NSRALEVHNGLQQNILQIR 434
           NS+  +    L   ++ ++
Sbjct: 399 NSKVFQTGTELLDVLMNLK 417